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Information for unigene UN52928
| FASTA Sequence |
| Unigene ID: UN52928 | Length: 843 |
SSR | | GGGAGAGTATCAACAAACCACAAAGAGAGAGAGAGAGAGAGAGAAAAAATATTTCGAAAGAGAACCTCAAAGAAGCCAATAGAGGG
ATACTCTATGTTGATGAAGTCAACCTCTTGGATGATCATTTGGTTGATGTGCTTCTTGATTCAGCTGCTTCCGGTTGGAACACGGT
TGAGAGAGAAGGGATCTCGATTTCTCACCCGGCGAGGTTTATCTTGATTGGTTCCGGGAATCCTGAGGAAGGAGAGCTTAGGCCAC
AGCTTCTTGATAGGTTTGGTATGCATGCGCAAGTAGGGACGGTTAGAGATGCTGATCTACGTGTCAAGATTGTTGAAGAGAGAGCT
CGGTTTGATAGTAACCCACAGGATTTCCGTGAGACTTACAAAACGGAGCAGGATAAGCTTCAAGACCAGATTTCAAATGCGAGAAG
CAATCTTTCCTCTGTCCAGATTGACCGGGAGTTGAAGGTGAAGATCTCTAAGGTGTGTTCGGAGCTCAATGTTGATGGGCTGAGAG
GAGACATTGTGACTAACAGAGCAGCAAAGGCACTTGCAGCTCTCAAAGGGAAAGATCGAGTGACTGCAGATGATGTTGCTACCGTT
ATCCCTAACTGCTTGAGGCACCGTCTCAGGAAGGATCCATTGGAGTCTATCGATTCAGAGTGTTGGTTTCTGAGAAGTTCGCTGAG
GTTTTCAGTTGAACAAGAGAAAAGATTATGTTATCATTTTCTTAACTTTTGTAACGATGAGAAGATCCTGAAGCAACAAACATGCA
AATCTGATTCTATACTTTCTACATTGAGTTGATTGAGTGTTCAAACAAACAGTCTAATGTTTTCTGCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_193583 magnesium-chelatase subunit chlI [Arabidopsis thaliana] | 963 | 4e-102 |
| XP_002867988 hypothetical protein ARALYDRAFT_914833 [Arabidopsis lyrata subsp. lyrata] | 961 | 7e-102 |
| XP_002276262 PREDICTED: hypothetical protein [Vitis vinifera] | 912 | 3e-096 |
| ABK95697 unknown [Populus trichocarpa] | 911 | 4e-096 |
| XP_002305090 predicted protein [Populus trichocarpa] | 911 | 4e-096 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P16127 Magnesium-chelatase subunit chlI, chloroplastic | 963 | 2e-103 |
| P93162 Magnesium-chelatase subunit chlI, chloroplastic | 901 | 3e-096 |
| O22436 Magnesium-chelatase subunit chlI, chloroplastic | 891 | 4e-095 |
| Q9TL08 Magnesium-chelatase subunit chlI | 791 | 2e-083 |
| Q9MUT3 Magnesium-chelatase subunit chlI | 777 | 7e-082 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B6SH71 Magnesium-chelatase subunit chlI | 963 | 3e-102 |
| Q0WUK7 Protein ch-42 | 963 | 3e-102 |
| A9PH44 Putative uncharacterized protein | 911 | 3e-096 |
| B9H2L3 Predicted protein | 911 | 3e-096 |
| B9S965 Magnesium-chelatase subunit chlI, chloroplast, putative | 901 | 4e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G18480.1 CHLI1; ATPase/ magnesium chelatase | 963 | 2e-104 |
| AT5G45930.1 CHLI2 (MAGNESIUM CHELATASE I2); ATPase/ magnesium chelatase | 884 | 2e-095 |
| AT1G08520.1 CHLD; ATP binding / magnesium chelatase/ nucleoside-triphosphatase/ nucleotide binding | 288 | 3e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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