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Information for unigene UN52955
| FASTA Sequence |
| Unigene ID: UN52955 | Length: 779 |
SSR | | GGGAGTCTAATGGGTTCTTGCTTCAGTTCTCGAGTCAAGGCCGAAAACCCTTTCAACGATGGTAAGAGCAGCGTTCTTTACGGCTT
AAGCATGTCGAGCCGGAAATCGTCGTCGTCGTCGACGGTGGCTGCGGCTCAGAAGACGGAAGGGGAGATATTTGAGTCAACGCCCG
TCAAGAGCTTCACCTTCAACGAGCTTAAACTAGCAACCAGGAACTTCAGACCGGACAGTGTGATCGGAGAAGGTGGGTTCGGTTGT
GTCTTTAAAGGCTGGTTGGATGAAACCAATCTCACTCCGACTAAACCCGGGACCGGTTTAGTCATCGCCGTTAAAAAGCTTAACAA
AGAAGGTCTTCAAGGTCACCGTGAATGGCTGGTACTGTGTTCACTTCCTCAAAACTTGCGTTATGTCCGTGTGTGATTGTGTTGTG
CTTTGTTCTGTTCCGTCTGATGCAGACAGAGATTAATTATTTGGGACGCTTGAGTCACCCGAACCTAGTGAAACTGGTTGGTTATT
GCTTGGAGGATGAACACCACCTTCTTGTATACGAGTTTATGCCAAAAGGAAGCCTTGAGAATCATCTATTCAGAAGAGGTGCATAT
TTCAAACCGCTTCCGTGGTTTCTAAGGATCAAGGTTGCGCTTGATGCAGCAAAGGGGATTGCTTTTCTCCACAGTGACCCTGTCAA
AGTGATATATAGAGACATTAAAGCCTCCAACATTTTGCTTGACGCGGACTATAATGGGAAACTCTCTGACTTTGGACTAGCTAGGG
ACGGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002879808 botrytis-induced kinase1 [Arabidopsis lyrata subsp. lyrata] | 543 | 2e-053 |
| NP_181496 serine/threonine-protein kinase BIK1 [Arabidopsis thaliana] | 537 | 8e-053 |
| BAE71262 putative protein kinase APK1A [Trifolium pratense] | 473 | 2e-045 |
| ABF95246 Protein kinase APK1B, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] | 468 | 8e-045 |
| NP_001049704 Os03g0274800 [Oryza sativa Japonica Group] | 468 | 8e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48814 Serine/threonine-protein kinase BIK1 | 537 | 4e-054 |
| Q8H186 Probable receptor-like protein kinase At3g55450 | 475 | 6e-047 |
| P46573 Protein kinase APK1B, chloroplastic | 460 | 3e-045 |
| Q06548 Protein kinase APK1A, chloroplastic | 450 | 5e-044 |
| P43293 Probable serine/threonine-protein kinase NAK | 432 | 6e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2PEU0 Putative uncharacterized protein | 473 | 2e-045 |
| A2XF30 Putative uncharacterized protein | 468 | 6e-045 |
| Q10NC1 Os03g0274800 protein | 468 | 6e-045 |
| Q10NC2 Protein kinase APK1B, chloroplast, putative, expressed | 468 | 6e-045 |
| B0L048 MLPK isoform 2 | 466 | 1e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G39660.1 BIK1 (BOTRYTIS-INDUCED KINASE1); kinase | 537 | 4e-055 |
| AT2G28930.1 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 460 | 3e-046 |
| AT2G28930.2 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 460 | 3e-046 |
| AT2G28930.3 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 460 | 3e-046 |
| AT1G07570.2 APK1A; kinase/ protein serine/threonine kinase | 450 | 4e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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