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Information for unigene UN52960
| FASTA Sequence |
| Unigene ID: UN52960 | Length: 762 |
SSR | | GGAATCCATGGTGAATCCTGAAGGAGACGCTGAAGTCTTCTTCTTTTATCTGCTCTCATTCTTCCCACCAGAAGGACAGTCTCTAT
CTCTCCGGTGCTAAATGAATTGTATTTGAAAATTGAATGTACAACAGATTCAGAGTTATGCTGCGTGCAACTTGTTTTACTCCTTC
CCTTTCCCGGGCGTGTTGCCCTTTATTCGCACTGATTCTCAGTACCCCATCTCTTCATCACCCGCATCATCCTAGCTCTTCTCCAT
TTCGTGGGTACCACTATAGCTCCTTACATGTCAAAGGAACTCGAGACAAACGACGTATTCTCGTTGATCACAACAGACATCTCTGC
GTCATACCCGAAGCTGCTAAACAGCCACCAGCTTCGACCTCTGAAAACTTATCAAGAAAAGCAAGGAAGAAAGCCATTCAGCAGTC
TCCTGAATCAATGCTGAAACAAAAGCTAGACATGTGCTCTAGGAACGGTAACGTCGTGGAAGCTCTTCGCCTGTACGACGAGGCCA
AACGCAACGGCTTGCAGCTCAGCCAGTACCATTACAACGTGCTTCTCTATGTCTGCTCGTTGACTGATGGGGAAACAGAGTCTTCT
TCTTCTTCTTCTACGAATCCAGGACTTAGTAGGGGTTTCGATATATTTAAGCAGATGATTGTTGACAAAGTAGTTCCTAACGAAGC
TACGTTCACGAACGGTGCTAGGCTCGCTGTTGCGAAGGATGACCCGGAGATGGCGTTTGATATGGTGAAACAGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM13880 unknown protein [Arabidopsis thaliana] | 798 | 4e-083 |
| NP_850186 proteinaceous RNase P 1 [Arabidopsis thaliana] | 798 | 4e-083 |
| XP_002881217 pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | 795 | 1e-082 |
| AAD15382 hypothetical protein [Arabidopsis thaliana] | 586 | 2e-058 |
| XP_002526061 multidrug resistance pump, putative [Ricinus communis] | 408 | 7e-038 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q66GI4 Pentatricopeptide repeat-containing protein At2g32230, mitochondrial | 803 | 5e-085 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SJ92 Multidrug resistance pump, putative | 408 | 5e-038 |
| B9H3L0 Predicted protein | 379 | 1e-034 |
| B9MX30 Predicted protein | 374 | 4e-034 |
| A5BPG8 Putative uncharacterized protein | 359 | 2e-032 |
| C5YB56 Putative uncharacterized protein Sb06g034140 | 295 | 6e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G32230.1 pentatricopeptide (PPR) repeat-containing protein | 803 | 5e-086 |
| AT2G16650.1 antiporter/ drug transporter | 203 | 2e-016 |
| AT4G21900.1 antiporter/ drug transporter/ transporter | 180 | 9e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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