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Information for unigene UN52984

FASTA Sequence
Unigene ID: UN52984Length: 792 SSR 
GGAAAAAGAAAACGGAAAAAAGGAAAAGGAAAGAAAAAAGGGGAAAAGAGAGAAAGAGAGAGAGAGAGAGAGAGACGAAGCGAGGA
CAATCAAAATCAAGTCGAATGTCTTTGCGGTTGTGTCTGGATATCCTCCGCAATTAAAAAAAAGAAAAAAAAAAATTGGGAGGAGG
CGCGATGAAACGCAAGCGGGATGAGGAGGAGAGGTTGTGCAGCATCGGAGATCGGATCCCAATTGATCTAAAGAAAGCGACAGTGA
CGAGATTGCCTGGGAGAAAACTCCTCGAATCTAAGGAGGACACAAGATTGCCAAGTAAGTTAGATTCGCTGCATTATGATCTTAAG
ATGGCTGTAATGAGTAGAGTGCCTGCCAAGTCGCTTATGAAGGTCCGATGCGTGTCGAAGATGTGGTGTTCCTTCATCCGAAGCCA
AGAGTTGGTGGATTCCATCTTCGCTGTCTCCTCAACACAAGCACGGTTTATAGTCTCTTTTAGCAACAACGCATTCGGCAAGCCTG
AAGAGAAGCTTACCTTCGTCTTCTCGTATCCAGAGGGGTCTTCTTTGGTACCCAGGTTCGAGATGGCATTACCAGTGGGATTGCGA
GCCAGCCAAGGGTATTGCGCTTCTCTCCATGGGTTTCTCAGTTTTTACATTGATCATGGTTTGATGGTTTGTAACCCTAGCACGGA
GCAAGTCTTTAATTTGCCCAAGACCACCCAATTCGTGGGGTACGATCCCATTGGTGGCCAACACAAAGCATTATCTGTGCATTTGA
GACATCCTTCTTCCCGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174543 putative F-box protein [Arabidopsis thaliana]4652e-044
XP_002893779 hypothetical protein ARALYDRAFT_890952 [Arabidopsis lyrata subsp. lyrata]4151e-038
XP_002893839 predicted protein [Arabidopsis lyrata subsp. lyrata]3882e-035
XP_002891001 predicted protein [Arabidopsis lyrata subsp. lyrata]3568e-032
XP_002865966 hypothetical protein ARALYDRAFT_357572 [Arabidopsis lyrata subsp. lyrata]3398e-030

Swiss-Prot top hits (Blast detail)Scoree value
Q9LPJ7 Putative F-box protein At1g326604659e-046
Q9SY20 F-box protein At1g307902713e-023
Q9C6J3 Putative F-box protein At1g508701745e-012
Q9FIH4 Putative F-box protein At5g424301621e-010
Q9SCL2 F-box protein At3g494501602e-010

TrEMBL top hits (Blast detail)Scoree value
Q9SY17 T17H7.31603e-009

Arabidopsis top hits (Blast detail)Scoree value
AT1G32660.1 F-box family protein4658e-047
AT1G30790.1 F-box family protein2713e-024
AT1G50870.1 F-box family protein1745e-013
AT5G42430.1 F-box family protein1621e-011
AT3G49450.1 F-box family protein1602e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members