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Information for unigene UN52997

FASTA Sequence
Unigene ID: UN52997Length: 766 SSR 
GAACGAGAGGATGAAAGCTCTTCAAGAACTCATTCCTCGCTGCAACAAGTCAGATAAAGCTTCAATGCTTGATGAAGCTATTGAGT
ACATGAAATCACTCCAGCTTCAAATACAGATGATGTCAATGGGATGCGGTATGATGCCAATGATGTACACTGGCATGCAACAGTAC
ATGCCCCACATGGCTATGGGGATGGGAATGGGCATGGAGATGGGTATGAACAGGCCTCCTCCTCCTCCTCCTCCTCCGTTCATGCC
ATTCCCAAACATGTTAGCTTCTCAAAGACCTTTACCTCCACAAACTCGCATGGGCGGCTACCCTGCTGTTCAAGCTTCTGATCCAT
CAAGAGTGTATGGATCAAACCAGCAGTTTGTTCCAAACTCGAACCAGGCTCCGTATTCTGGTTACATGGATCCGTATCAGCAATTC
CGCAGTCTCCACCCTAGCCAACCACCTCAGTTTCAGAATCAAGCAGCATCGTACCCAAGTTCAAGCAGGGTAAGTAGTACCAAGGA
ATCCGAGGATCAAGGAAACCAAACAACGAGTTGATGAGATCCTGAGCCAAGATGATCTGTTTTCACAAGCAATACACAATTTTGAG
AAAATTGACAGAGAGAAAGAGTTAACATGTACATCGCAGTTTCATATATACATATGTATTATATTCTTGTTGTTATTCTCTCTTCC
GGATTGTATACTACTTAGATATCTGTACATGTCAAGTCCCATAAATTTAGGAATTTATACATACAGTTGAAGAGACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883941 hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp. lyrata]7286e-075
AAD24380 unknown protein [Arabidopsis thaliana]6174e-062
NP_179608 transcription factor PIF1 [Arabidopsis thaliana]6076e-061
NP_849996 transcription factor PIF1 [Arabidopsis thaliana]6076e-061
BAF00716 putative bHLH transcription factor [Arabidopsis thaliana]6076e-061

Swiss-Prot top hits (Blast detail)Scoree value
Q8GZM7 Transcription factor PIF17175e-075
Q8GT73 Transcription factor bHLH1193913e-037
Q9SVU6 Transcription factor bHLH232435e-020
O80536 Transcription factor PIF32131e-016
Q8L5W8 Transcription factor PIL12069e-016

TrEMBL top hits (Blast detail)Scoree value
B9S581 Phytochrome-interacting factor, putative4552e-043
B9GR94 Predicted protein4462e-042
A2Q5K3 Helix-loop-helix DNA-binding4247e-040
B9GSQ9 Predicted protein2761e-022
A2XJY8 Putative uncharacterized protein2662e-021

Arabidopsis top hits (Blast detail)Scoree value
AT2G20180.2 PIL5 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 5); DNA binding / phytochrome binding / transcription factor7184e-076
AT2G20180.1 PIL5 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 5); DNA binding / phytochrome binding / transcription factor7184e-076
AT4G28811.1 transcription regulator3913e-038
AT4G28790.1 basic helix-loop-helix (bHLH) family protein2434e-021
AT1G09530.1 PIF3 (PHYTOCHROME INTERACTING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription regulator2131e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members