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Information for unigene UN53050
| FASTA Sequence |
| Unigene ID: UN53050 | Length: 881 |
SSR | | GGGCTCTATCCGTCGTTTCACATCTTCTTCTTCTTCTTACTCTCATTTCCCCTCCCCGCCGCCTCCACCTTCTCGCTTACCCTCAA
TCTCCTCGTTCTGCACCGTTCCTTCATCAATGGCAGCTAGCCATCACAAAGACGAGGCGTATCTCTCCGCCGTCATCCCCAAGCGT
ATCGCCCTCTTCGAGCAGATCCAAGCCAATCAGCTCGAGAAGCTCAAGTCTCTCCCCCACGATCCAATCAAGATTACGTTGCCAGA
TGGGACAGTGAAAGAAGGGAAGAAGTGGGAGACGACTCCGATGGACATCGCGGCTGGGATTTCCAAGGGTTTGGCTAACTCTGCGT
TGATTTCGGCGGTCAACGATGAGTTGTGGGACATGAGTAGGCCGTTGGAAGGTGATTGCAAGCTTGAGCTGTTTAAGTTTGATAGT
GATAAAGGAAGGGACACTCTCTGGCACTCTAGTGCTCACATTCTTGGTCAGGCTATTGAGCAGGAGTATGGGTGTCAGCTGTGCAT
TGGACCGTGTACAACGAGAGGGGAGGGTTTCTACTATGATGCGTGTTATGAAAAAGACTTGGGATTGAATGATAATCACTTCCCTA
ACATCGAAGCAGGTGCTTCGAAAGCTGCTAAGGAAGCGCAACCATTTGAAAGGATTGAAGTGACAAAAGATCAGGCGATGGAGATG
TTTTCTGAGAACAAGTTTAAGGTTGAAATCATCAAGGATTTACCTGCTGACAAGACCATTACAGTCTATCGATGTGGGCCTCTTGT
TGATTTGTGTCGTGGACCGCACATACCAAACACTTCTTTTGTGAAAGCTTTCAAGTGTTTGAGGGCCTCATCAGCTTACTGGAGAG
GTGACAGAACGTGAGAGTTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872240 AT5g26830/F2P16_90 [Arabidopsis lyrata subsp. lyrata] | 1267 | 2e-137 |
| NP_198035 threonyl-tRNA synthetase [Arabidopsis thaliana] | 1226 | 1e-132 |
| CAA74705 threonyl-tRNA synthetase [Arabidopsis thaliana] | 1226 | 1e-132 |
| AAK82468 AT5g26830/F2P16_90 [Arabidopsis thaliana] | 1191 | 2e-128 |
| CBI39735 unnamed protein product [Vitis vinifera] | 1019 | 1e-108 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04630 Threonyl-tRNA synthetase, mitochondrial | 1226 | 6e-134 |
| Q8GZ45 Probable threonyl-tRNA synthetase, cytoplasmic | 683 | 6e-071 |
| Q54J66 Probable threonyl-tRNA synthetase 1, cytoplasmic | 656 | 8e-068 |
| P52709 Threonyl-tRNA synthetase, cytoplasmic | 592 | 2e-060 |
| Q0V9S0 Probable threonyl-tRNA synthetase 2, cytoplasmic | 578 | 8e-059 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HJR1 Predicted protein | 1013 | 5e-108 |
| B9S4M4 Threonyl-tRNA synthetase, putative | 984 | 1e-104 |
| B9G059 Putative uncharacterized protein | 933 | 9e-099 |
| Q6Z0N5 Os08g0295300 protein | 933 | 9e-099 |
| B8B9C0 Putative uncharacterized protein | 931 | 2e-098 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G26830.1 threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS) | 1226 | 6e-135 |
| AT1G17960.1 threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative | 683 | 5e-072 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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