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Information for unigene UN53060
FASTA Sequence |
Unigene ID: UN53060 | Length: 710 |
SSR | | GGGTCACTGTTGTAAAAATAAAAATTGGGGGGTTTCTCAATCACGCTCGCTCGCTAGCTCGCTGCCAGATCCAGAGTCAAAATGGA
GTCACCGCCACCTCACTCGAATTTGCTCCCCGAAGTTGACTCCCTCCCCGATGGATCCGTCGACGACGGAGCTGCTGTTGACCCAC
CTCTCGTTTCTCCGGCTACCACCGACGAACAAAATCGTGATGATGATGTCCCGATCGAGAAAGCAGAGAAGCCCAGGACTTTCCCC
GTTCCTCTGTGTGAAGAAACAGATGGCAATGACGACGAGGTGGAGGAGGTGGATGACCTAAGCAAGGTCTCGAGCAAGCTTAGCTT
AGAGCAGAAAGAATCATCTCCTCCTCCTCCTCAAACATTATCAGAAGGGTCTACTCAAAATCCAAACTTGGCCAAGGACAAGGCGA
CGGACTCTACTCAGAGTGTGGATTCGGTCAAACCCAGAAAACAAGAGCGTAAGAGTTCAAAGAACATGTTCAAATCAGAAAAGGAG
TTTCTTGAATTCATGCTCAAGTATCAACAAGTCCTTTCCGAAAGAGATTCTGCTATTACTGTCCGTGACGAGCTTGAGTCACTTTG
CAGAGAGTTACAACGTCAAAACAAAATGTTAATGGAAGAATGCAAGCGGGTGTCGACTGAGGGACAGACTTTAAGATCAGATTTGT
CCACCAAGTTCCAGGACGCAAT
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GenBank top hits (Blast detail) | Score | e value |
NP_199897 uncharacterized protein [Arabidopsis thaliana] | 698 | 2e-071 |
NP_974921 uncharacterized protein [Arabidopsis thaliana] | 694 | 4e-071 |
XP_002864079 hypothetical protein ARALYDRAFT_495147 [Arabidopsis lyrata subsp. lyrata] | 685 | 5e-070 |
XP_002276892 PREDICTED: hypothetical protein [Vitis vinifera] | 350 | 3e-031 |
XP_002529722 taxilin, putative [Ricinus communis] | 344 | 2e-030 |
TrEMBL top hits (Blast detail) | Score | e value |
Q8RXD7 At5g50840 | 698 | 1e-071 |
Q3E6R9 Putative uncharacterized protein At5g50840.2 | 694 | 3e-071 |
B9SUQ3 Taxilin, putative | 344 | 1e-030 |
B9HU43 Predicted protein | 340 | 3e-030 |
Q9FGD8 Genomic DNA, chromosome 5, TAC clone:K16E14 | 278 | 5e-023 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G50840.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: LINC2 (LITTLE NUCLEI2) (TAIR:AT1G13220.2); Has 50047 Blast hits to 27335 proteins in 1173 species: Archae - 429; Bacteria - 3521; Metazoa - 26018; Fungi - 2663; Plants - 1200; Viruses - 162; Other Eukaryotes - 16054 (source: NCBI BLink). | 698 | 7e-074 |
AT5G50840.2 INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G59210.1); Has 48881 Blast hits to 26998 proteins in 1148 species: Archae - 400; Bacteria - 3488; Metazoa - 25141; Fungi - 2545; Plants - 1208; Viruses - 169; Other Eukaryotes - 15930 (source: NCBI BLink). | 694 | 2e-073 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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Unigene Members | |
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