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Information for unigene UN53213

FASTA Sequence
Unigene ID: UN53213Length: 788 SSR 
ATTATAGAAACGTTTTGGATATCATCTTCTCCCATGGGTTAGGAACCGTTTAAGAGACTTGACAAAGACATTCTGATAGCAAGTTA
GTTTCATAGAAAGCTCCTTTTCACCATAATCCAAACCCTGGATCCGGTTCCAAATCTCTAGAGGTATATATGATTTGTTTTATTCA
GTTCTTATTTTTAATTAAAGAAATGGGCAAAGATTAAACCCGGATAACTCAGGTGCTGGATCCAATTTATTGCTCAGTGTGAAGAA
GAAGCTTTGACCAAAAAAAGAGGAAGGTGATGCTCCAACACTGCCATGAGCTGATGATGATGATGACCTTTGTATACTTCTTCCTC
TGTGTCCACCACATCAAAGCCTTGAAGCTGCTTCACCGCTTCCATGAGCTGTCCCCTTAGTCTCTGTGAGAGCAACCTCCCTCCTG
CTTTCACACACTCTCTGTACAGTGGCATGTAAGCGACTGCAACTCTCAATGGACCTGGGAGGTCCTTCAAACGTATAGCAGACTCG
CCAATCTTCAAAACCCTCATGAAGTTCATGAAGTTCTCGCGGCTTTCCCTCACCCCTTGGCTGAATGCAGCCTCTGACCAGTGTTC
TTGGAGAAACGTTTTCAGCTCCGAAGGTACAGACTCGTCTTCTGACTTTGCAATGGTGTCTGCAACTGAGTAAGTGGCAACCGGAT
CACCGAGGAAGTCTGATTTGAGGAGAAACTCTACTCCGTAGAGAGAACCATCGCTTCTTTCACCAGCTGCTTTGAGGATCTCGATG
CTGAGAGCAGTGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881948 hypothetical protein ARALYDRAFT_483529 [Arabidopsis lyrata subsp. lyrata]7457e-077
NP_566008 ankyrin repeat-containing protein [Arabidopsis thaliana]7278e-075
AAK82517 At2g44090/F6E13.22 [Arabidopsis thaliana]7152e-073
XP_002878304 hypothetical protein ARALYDRAFT_486455 [Arabidopsis lyrata subsp. lyrata]6141e-061
NP_191550 F-box/ankyrin repeat protein SKIP35 [Arabidopsis thaliana]6103e-061

Swiss-Prot top hits (Blast detail)Scoree value
Q9M1Y3 F-box/ankyrin repeat protein SKIP356145e-063

TrEMBL top hits (Blast detail)Scoree value
O80579 AT2G44090 protein7357e-076
Q94AD7 At2g44090/F6E13.227232e-074
Q53HY3 Putative uncharacterized protein mc3075798e-058
A5BXT4 Putative uncharacterized protein5457e-054
B9T519 Putative uncharacterized protein5385e-053

Arabidopsis top hits (Blast detail)Scoree value
AT2G44090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59910.1); Has 61 Blast hits to 61 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 40; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink).7354e-078
AT2G44090.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59910.1); Has 61 Blast hits to 61 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 40; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink).7354e-078
AT3G59910.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44090.2); Has 43 Blast hits to 43 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).6144e-064

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members