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Information for unigene UN53218
| FASTA Sequence |
| Unigene ID: UN53218 | Length: 716 |
SSR | | CAAAAAACACAACAAACATATATAAAATCTTTCTTTTGCTCTGAAACTCGAAAATGTAAAATGGAAACAAGTGTATAAATAGATTG
GTAAACAAATATTATATATAGCTCACAACAAATAAGAACTCACCGTTAACATGAGACCTCTTTTTGTTTTTGTATATAATCTATTT
GCTTTTGTGATGGTTTCTTGTGTTTCACGGCTTATCTCCAGTCGATAAAAGACTTGCAAATCCTTGTGAGAGACTTCGCTCAATCA
TACAATGCGAGTTGGATGAACATCTTGGATTGTCCTCGGATCTCATTCGTTTCAAGTATGGTGACGAAAAAGAGTATCGACTTTTA
GATACTTCATCATCATCATCATCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCATCGTAGTCTTTGGATGTTTTTCT
CTTTAAGCCTGGAACACTTCTTAAACCAGTGTGGTAGCGGCGATCATCTTTATGATGCTTATCTGAAAGAGGATCTTCAAAAAGGC
ATGATTCAGAGTCTGTGTCCCCACAGTTACAGGACAAGCTAGTGTTCTTACTCGGTCCTAGAACACTGTACATATGCTCAACAAAC
TCATCGATGAGGACAGGCCAAGCACCTTCAGAGTCATATCCTTCGAGATTCTCATGTACACAACGACTAAACGCCAAGACTTGTTG
CCATGTATCTTCTGAAATATTGTGCCGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189539 uncharacterized protein [Arabidopsis thaliana] | 496 | 4e-048 |
| XP_002877147 hypothetical protein ARALYDRAFT_347271 [Arabidopsis lyrata subsp. lyrata] | 469 | 6e-045 |
| XP_002531855 conserved hypothetical protein [Ricinus communis] | 354 | 1e-031 |
| XP_002324063 predicted protein [Populus trichocarpa] | 331 | 6e-029 |
| XP_002283688 PREDICTED: hypothetical protein [Vitis vinifera] | 330 | 7e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5RDF9 DCN1-like protein 5 | 135 | 1e-007 |
| Q1RMX9 DCN1-like protein 5 | 134 | 2e-007 |
| Q9BTE7 DCN1-like protein 5 | 134 | 2e-007 |
| Q9CXV9 DCN1-like protein 5 | 134 | 2e-007 |
| Q5PPL2 DCN1-like protein 5 | 134 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9MBG8 Genomic DNA, chromosome 3, TAC clone:K5K13 | 496 | 3e-048 |
| B9T0T6 Putative uncharacterized protein | 354 | 8e-032 |
| B9IJZ0 Predicted protein | 331 | 4e-029 |
| A5C832 Putative uncharacterized protein | 309 | 1e-026 |
| B6TMX2 Putative uncharacterized protein | 209 | 5e-015 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G28970.1 AAR3 (antiauxin-resistant 3) | 496 | 2e-050 |
| AT3G12760.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Defective in cullin neddylation (InterPro:IPR014764), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15860.2); Has 628 Blast hits to 626 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 408; Fungi - 99; Plants - 64; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). | 147 | 5e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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