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Information for unigene UN53239

FASTA Sequence
Unigene ID: UN53239Length: 895 SSR 
GAAGAAACATAGGTAGTCTTGTTTACCAATACATAACCATTAAACAAGTGTCAAGAATCGTGTTCCTTTTGACTGTTTTAGAGGAA
CTCTTGGAACACTTCCACTTTTTTTTAATACAAACGAGAGTAAATCAATAGAAAGCAAAAAGCAGTGCTGAAACTACTGACTGAAA
TGTATTTTACAACTGAGAAAAAAAGTAAGGAAAGAAAAATCAGACGAATTGGATGTTGCACTTTGATGAAATTCTTGGGAGAGCCA
GTAGATCATCTTTCAAGAGCTGACTATCGTCGTCTTGTGCGTCAACACTCACTTTCACAGATTCAAGACATTTCAACTTGCACAAG
AAATGTTTCATCTGCTTCACCTCTTCTGAAGAAGCTCTGTAATCAGATATCTCAAGAACCTTCACTTGACATGTCAATAGACAACA
TACCACTTCCTCCTCCTTCTTTTTATGCTTTACAGGAGTGCAAGCGCATGCATCTCCACACTTATTTGTTACTCTGTGCAAAAGTC
CCTTGATAGCAAAAGTGTGTAGACGTGGACAACTCTTGAGCAAAGCTGGCATTACATGCCAACCTTTTTCTTTGTCACTCTCAATA
GACAAATTGAGGAGGTTGTTGAACACCGGCATGGATTTGCAACAGAAGTGAAACGTCTCAAGGGAATGAGCAGACAAGTAAAGGGT
GGTAATGTTGGTTATACCCGCAACTAGCTTTGTAACATCACCATAGATAGGCATCCTTTGTTCATCATCATCAATGATAAAATAAC
CATCATCATCATCATCATCATCAGAATAATCATAATGGCTAGTTGACTCCTCCCATAACTTGAGATCGAGCCTGGCTTCGACGAGC
AAATCCAAACCATCACAGTCATGGTATTCAAGACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAD94953 hypothetical protein [Arabidopsis thaliana]7475e-077
Q56XW8 RecName: Full=F-box/LRR-repeat protein At1g484007475e-077
NP_175273 F-box/RNI-like/FBD-like domain-containing protein [Arabidopsis thaliana]6822e-069
NP_175228 FBD domain-containing protein [Arabidopsis thaliana]6776e-069
AAG51784 hypothetical protein; 20887-22372 [Arabidopsis thaliana]6776e-069

Swiss-Prot top hits (Blast detail)Scoree value
Q56XW8 F-box/LRR-repeat protein At1g484007472e-078
P0C2F8 Putative F-box protein At1g645405402e-054
Q9LM64 Putative F-box protein At1g219904821e-047
Q84RK6 F-box/LRR-repeat protein At2g299304685e-046
Q9FF23 Putative F-box protein At5g383903914e-037

TrEMBL top hits (Blast detail)Scoree value
Q1PFM5 Syntaxin-like family protein6774e-069
Q9C696 Putative uncharacterized protein T6B12.56774e-069
Q9LXR3 Putative uncharacterized protein T20N10_2403262e-028
O82216 Putative non-LTR retroelement reverse transcriptase2788e-023
Q9LX44 Putative uncharacterized protein F25L23_1302455e-019

Arabidopsis top hits (Blast detail)Scoree value
AT1G48400.1 F-box family protein6835e-072
AT1G47920.1 syntaxin-related family protein6773e-071
AT1G64540.1 F-box family protein5464e-056
AT1G21990.1 F-box family protein4838e-049
AT2G29930.2 F-box family protein4684e-047

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members