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Information for unigene UN53287

FASTA Sequence
Unigene ID: UN53287Length: 740 SSR 
GAGAAGATTTATTAGGATGATCATTACCTGTTATTGGTGCATATATATATAATAATCTCAAACAACACTATGACATTAAGTTGTAG
GCAATTTTCAAAAGCTTCAAATGATGTTTTATATACATTGTCTCTTATATTAATACAAATTGTTGACAGCCCCAACTTCTCTCTCT
TCACATCACACAGCATTTAGCTGGTCCCTTTGGATCAGCCATAGCTTCCTCGGTACCTTCCGGGGGCTGAGCTAACTTGCGGTTAT
GTGAAGTCATCATTTCTTTTTTAAGTTTAACCAGAATGTCCTCCATTGTGTATTCTCGGCGCCAGTTAGCGAGCATAGGGAAAAAA
CTAGGTTCAACCACTCCAGTCTCAGGGTTAACACAGGCCATGTTAATCCGGGTCTGGAACTTGACACTTGGTGGACTCTCTGGGTA
TTCCTTACCACAAAAAAGCTTGAGCTGGAAGATTTTCCCATCGTACGCAGTATTATGAGGGCCGAGAATGGTGCCAGTCCAGGATT
GCATATAGATATCATCAGCGTCGTCCATTCCATAGCTTACCGTACCATCTCCGATACCTTTCTCTCCTCTCTCTAGCTCTTCCAAC
AACCTAAAGTTCCTTGGCACAACGACCTTGGCTTCCTCCGAGCTCATCGTAGACGGAATCGAGATAAAGATGATAAGGAACGATTA
GAGAGAGAGAGAGTGTGTGTGTATAGAGAGAAAAGATTGGAAGAGGAAGAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564191 ubiquitin-conjugating enzyme E2 variant 1A [Arabidopsis thaliana]8065e-084
XP_002893271 hypothetical protein ARALYDRAFT_889865 [Arabidopsis lyrata subsp. lyrata]8002e-083
AAM65883 E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana]7196e-074
NP_564994 ubiquitin-conjugating enzyme E2 variant 1B [Arabidopsis thaliana]7188e-074
XP_002887321 hypothetical protein ARALYDRAFT_476195 [Arabidopsis lyrata subsp. lyrata]7188e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q93YP0 Ubiquitin-conjugating enzyme E2 variant 1A8062e-085
Q9CAB6 Ubiquitin-conjugating enzyme E2 variant 1B7184e-075
Q9SVD7 Ubiquitin-conjugating enzyme E2 variant 1D6191e-063
Q9SJ44 Ubiquitin-conjugating enzyme E2 variant 1C5851e-059
Q54D06 Probable ubiquitin-conjugating enzyme E2 variant4309e-042

TrEMBL top hits (Blast detail)Scoree value
B9HW26 Predicted protein6917e-071
A5B7Q8 Putative uncharacterized protein6675e-068
B9HJF6 Predicted protein6641e-067
Q45W76 Ubiquitin-conjugating enzyme 26569e-067
C6T394 Putative uncharacterized protein6551e-066

Arabidopsis top hits (Blast detail)Scoree value
AT1G23260.1 MMZ1 (MMS ZWEI HOMOLOGUE 1); protein binding / ubiquitin-protein ligase8072e-086
AT1G70660.1 MMZ2 (MMS ZWEI HOMOLOGE 2); protein binding / ubiquitin-protein ligase7193e-076
AT3G52560.1 UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase6191e-064
AT3G52560.2 UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase6073e-063
AT2G36060.1 ubiquitin-conjugating enzyme family protein5859e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  100%

Unigene Members