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Information for unigene UN53333
| FASTA Sequence |
| Unigene ID: UN53333 | Length: 764 |
SSR | | GACAAGTTACAATAGTATTCATAGGCGGAAAATACACATTTATAATTTCTCTCTCTCTCACAAAGATAAAAAAAAACTTGAACAGA
TAAAAAGGGAAATTAACGATAAAGTTTTGGCAGCTATCCGGAGATTTTGTAACTGGGGTTGACAAGATTGTCTAAACCGGAGACAA
CTTGAATGGACTCAATGACATCACCAACTTTAAGATCAGCCAGAAAATCTTCATTCTGAGTAACGTAACCGAAGACAGCGTAACGA
CCGTCCAAGATGTTGGAATTGCTTGGGGTCAGCTCACTCTCCTTCAGCAGCCAAAACACTTGGCTCGATCCCGAGTCATTCTCAAA
CTCTTCTCTAGCCATAGCCATTGTCCCAAATGCGTTGAAAGGAAGCATCACCTGAGCCTTGTACAGACCCAATTCTTCGAGGGTTG
AGCCGTAAAAAGGAGTCTTCTTGCCAGCCACCATAATCTCAAGAGGAACAGTCCTCACTTTCTCAGTGCTTGGATCTATAAATCCT
TCCGCAGGACCCTCTGGATCTCCTGTTTGTACCACAAACCCATCAGATCTCTGGATCTCCATGCCATCGTAGAAATGGCGCTCCAC
CAAATCGACAAAGTTCCCAGCCGTAACAGGGGCGTTATAGCCATCAAGTACAATGCGAAAGACACAATCCTGGAGGTTAGGGTTGT
CCTTGATCTTGACCTTCATGTCGAGAGTGGCTCTTCCTTGGAGAAGAGGCATGTTGCGGTACTCATCGGGGACTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884278 hypothetical protein ARALYDRAFT_477375 [Arabidopsis lyrata subsp. lyrata] | 1060 | 2e-113 |
| NP_186797 peptidyl-prolyl cis-trans isomerase CYP38 [Arabidopsis thaliana] | 1051 | 2e-112 |
| BAH20293 AT3G01480 [Arabidopsis thaliana] | 1051 | 2e-112 |
| XP_002517345 peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis] | 1006 | 3e-107 |
| XP_002323806 predicted protein [Populus trichocarpa] | 988 | 4e-105 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SSA5 Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic | 1051 | 9e-114 |
| O49939 Peptidyl-prolyl cis-trans isomerase, chloroplastic | 981 | 1e-105 |
| Q55118 Putative thylakoid lumen peptidyl-prolyl cis-trans isomerase sll0408 | 542 | 1e-054 |
| P72704 Probable peptidyl-prolyl cis-trans isomerase sll0227 | 336 | 8e-031 |
| P82869 Peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic | 144 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DHS6 AT3G01480 protein (Fragment) | 1051 | 1e-112 |
| B9RUU4 Peptidyl-prolyl cis-trans isomerase, putative | 1006 | 2e-107 |
| B9IJN4 Predicted protein | 988 | 3e-105 |
| B6U5I1 Peptidyl-prolyl cis-trans isomerase | 977 | 5e-104 |
| C5YKK8 Putative uncharacterized protein Sb07g019320 | 972 | 2e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G01480.1 CYP38 (cyclophilin 38); peptidyl-prolyl cis-trans isomerase | 1052 | 7e-115 |
| AT3G01480.2 CYP38 (cyclophilin 38); peptidyl-prolyl cis-trans isomerase | 571 | 4e-059 |
| AT3G15520.1 peptidyl-prolyl cis-trans isomerase TLP38, chloroplast / thylakoid lumen PPIase of 38 kDa / cyclophilin / rotamase | 144 | 1e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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