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Information for unigene UN53343
| FASTA Sequence |
| Unigene ID: UN53343 | Length: 910 |
SSR | | GCTTAAACTTTACTTTATTCTTCATAAATAAATGTATCACAGCTACAATTGATTTAGATCCCAAACAAATTTGATTTCCATCAGTT
CATAAAAGGCCCACCCACTAAAAGTGCTAAGCTGAAGTATTCCTTACCTTCAAACTCTTAAGCTGCTGCAAGTGGCTGAAGAGCTT
TAAGAGGGTTCATGATGACACCATCGATAAGTCCATAATCTTGAGCCTCTTTAGCACTCATGAAGAAATCACGGTCAGTGTCTTGG
TTTATCTTGCCGAGGCTTTGACCAGTCTGGTAAGCGAGGTAACCGTTTAGGTTAGCCTTGTGGTGCAGCATTTCATTCGCCTGAAT
GTCGATATCAGTCTGGCCACCTTGAGCTCCACCAAGAGGCTGATGGATCATTATCCTAGAGTTTGGTAGACTGTATCTTTTTCCTT
TGGTTCCAGGACTAAGCAGAAAAGCTCCCATACTGTTTAACAAACACACAGACACAGAAGAGAAGAGAAGAGAAGAGAAGAGGAGA
TTGTTTTCCATAAATCATAAATGATAATTTGGTAAACATTAAGAAGATAGAGATAAGCAGCGTGAACAAGAAAACTATCAGCAAAG
ACACCGAAAAGATAAAAGAATAAATGAAAGAGGATGGATGGTACCTAGCAGCAAGAGCAACACGAACAGTGGAGACATGAGGTCGG
ATATGCCTCATGGTATCGAATATAGCCATGCCAGCAGTAACAGATCCAGCAGGAGAATTCACATACATGACAATATCCTGTCCAAT
AATAAAGAAGCAAAGAATCAAGGAACTAAGAGATGAAATTTGGAGTAGTAAGAAAGATGTGAGCTTAGTAGGATCAAGTAGAGAAG
CTGAGCTACGATGATGTTGGCCATATCATCATCCACAGCACCACCACACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_563657 ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana] | 529 | 9e-052 |
| XP_002889406 hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp. lyrata] | 529 | 9e-052 |
| ACU23464 unknown [Glycine max] | 528 | 1e-051 |
| CAC67407 Clp protease 2 proteolytic subunit [Solanum lycopersicum] | 523 | 5e-051 |
| XP_002302770 predicted protein [Populus trichocarpa] | 519 | 1e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S834 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic | 529 | 4e-053 |
| Q3MFR5 ATP-dependent Clp protease proteolytic subunit 1 | 347 | 5e-032 |
| Q7M7M3 ATP-dependent Clp protease proteolytic subunit | 344 | 1e-031 |
| Q8YXH5 ATP-dependent Clp protease proteolytic subunit 1 | 342 | 2e-031 |
| P54416 ATP-dependent Clp protease proteolytic subunit 1 | 336 | 1e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6TKM4 ATP-dependent Clp protease proteolytic subunit | 528 | 9e-052 |
| Q93YH0 ATP-dependent Clp protease proteolytic subunit | 523 | 3e-051 |
| B9GST6 ATP-dependent Clp protease proteolytic subunit | 519 | 9e-051 |
| B9I9I1 ATP-dependent Clp protease proteolytic subunit | 519 | 9e-051 |
| B8K1W3 ATP-dependent Clp protease proteolytic subunit | 514 | 4e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G02560.1 CLPP5 (NUCLEAR ENCODED CLP PROTEASE 5); serine-type endopeptidase | 530 | 3e-054 |
| AT1G66670.1 CLPP3; serine-type endopeptidase | 271 | 3e-024 |
| AT5G45390.1 CLPP4 (CLP PROTEASE P4); serine-type endopeptidase | 264 | 2e-023 |
| AT1G11750.1 CLPP6; serine-type endopeptidase | 220 | 3e-018 |
| AT5G23140.1 NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7); serine-type endopeptidase | 194 | 3e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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