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Information for unigene UN53456
| FASTA Sequence |
| Unigene ID: UN53456 | Length: 851 |
SSR | | CGCAGAGACATTTAGCATTATAAATAATCAATCAAATGTTTGAATATGTTTTCACAGACACAAACACAAATACATCAACGGTCAAG
AATCTGACCAGAAAAATAAAAGATTTATAAAGATTTCAGAAGGAAACAAAACACAAAAGCACAGCAAGGTTGATCTGTTTGAATCT
AACAGCTAAATCAAAACTCTCGGCCAGGAGGTGTTTTGTTGTTGTTAGCTCCTCCTCCTCCTCCTCCTCTATGAGTCTCCTCGCTG
CTCGAGGAAGATGGGTGAAGCCCATACTCGCTCGCGTTCCCATACTCGCTCGTGTTCCCATAATCCTGGCTATCCAACGCCACTTT
CCTGAACTTCTTCATATCCGCACTGTAACTCCCCGAGTCATAGTCAGAGCTTGAACCCCCCCCGAAGAGTGCGCTCTGTCCAGGCT
TGGCTCCTTCGTTTAGATCATCTAGCGATGCATCTCCCTCTAGAGCTCGAACAATTTGGCTCATCTTAGGCCTGCGTCTAGCTGAG
TGTCTGATGGCTGCAACAGCACAAGCCACCATTCTTGCCATCTCATGGCTCGTATTGGCCCTCGAGACGTGGATCAACTAGTTCAC
TGTAATCTCCGTCTTGAGCTGCGTTTAAGCACAAGGGTCTTGCCCAATCAGCCAAACTGTCTTCCATTTCACCAGTGAGATCAACA
GGTCGACGTCCGGTTATGAGCTCAAGAAGCATCACTCCAAAGGAGAAAACATCTGACCTGTCTGTCAGTTTACCGCTTGATGCATA
CTCTGGAGCCAAGTACCCGAAAGTTCCCATGATACGAGTGGACACATGTGTAACGTTGTCCTGAGATAGCTTTGCTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885280 hypothetical protein ARALYDRAFT_898257 [Arabidopsis lyrata subsp. lyrata] | 497 | 4e-048 |
| NP_188511 protein kinase family protein [Arabidopsis thaliana] | 485 | 1e-046 |
| BAB01809 somatic embryogenesis receptor kinase-like protein [Arabidopsis thaliana] | 480 | 4e-046 |
| XP_002894165 hypothetical protein ARALYDRAFT_314348 [Arabidopsis lyrata subsp. lyrata] | 445 | 5e-042 |
| XP_002869145 predicted protein [Arabidopsis lyrata subsp. lyrata] | 431 | 2e-040 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LQQ8 Probable serine/threonine-protein kinase RLCKVII | 242 | 7e-020 |
| Q9FE20 Serine/threonine-protein kinase PBS1 | 226 | 5e-018 |
| O49840 Protein kinase 2B, chloroplastic | 222 | 2e-017 |
| P46573 Protein kinase APK1B, chloroplastic | 217 | 6e-017 |
| Q3EDL4 Probable serine/threonine-protein kinase At1g01540 | 215 | 1e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LS95 Somatic embryogenesis receptor kinase-like protein | 480 | 3e-046 |
| Q9XI96 Protein kinase family protein | 429 | 2e-040 |
| O65672 Putative serine/threonine protein kinase | 428 | 3e-040 |
| Q8GX23 At4g34440 | 428 | 3e-040 |
| B9RBE2 Somatic embryogenesis receptor kinase, putative | 421 | 2e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G18810.1 protein kinase family protein | 485 | 4e-049 |
| AT1G49270.1 protein kinase family protein | 429 | 1e-042 |
| AT4G34440.1 protein kinase family protein | 428 | 2e-042 |
| AT2G18470.1 protein kinase family protein | 369 | 1e-035 |
| AT3G24550.1 ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase | 346 | 6e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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