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Information for unigene UN53565

FASTA Sequence
Unigene ID: UN53565Length: 790 SSR 
CGCCACAAAAAAAAAACATCAACTCCAAAACTTAAAACTGATCACAGTAGCTACATCTGGAATCTAGCAACTCTGTTCAAGACTCA
AGAGTTTAGCTCCCATCACATACAAAATGAACCATTCCAAAGCAAAATCCAGTAATAAACCAATAGAAAGAGACATGCAGGCTCCA
TAAAACCTCAAGACTGAGAGTGTGGCGGGTAAAGTAGATTACAAAAGTTCTTTGGTGAAAATCTGTCAAAAGCACTGAGGATAGGG
CTTGCCAACATTGTTCAAAATGTGTAATTGACCTAAACGTTTTGTGACGAAAATTGAAAAAAAAAAAAAAAAAAACCCACGATAAA
AGACAAGACGTATCAGTTATGCAAGCTCACGCAGCTTGGTGTCAATTCCAACCGTCACTTTCATTCCCATTAGCACCGACCTGGGG
AGGTTCTACCACAGCATGTGAGCTTCTTGTCGAATCCGGGAGCTGGATGGAATGGTCAAATCTACAAGCTGGGCCAAATTTGCAAA
TGCCGTAGCGACTGTAATGAGTGCAAATGACTTGATCAGGCCTAAGGGGCAAGCCCTTGTCATTGAGAGCGTAAGGAGGCTGTTTC
GGCAAACGATTCTTAGGATGATGGTATTTGCAAGTGAACTTGAACTTACAATCCCCGGTTTTGAGATAGTAACTGCACTCAGGCTG
GTCCGGACGTTCTGGAAACTCCTCAGCAGGTTTTTGATATTTGTATGGTGTGAAAATACTTGTTTCAGCTACTGAGTTGTTGTTGT
TGTTGTTCATAAGGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875904 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata]6122e-061
NP_190414 zinc finger CCCH domain-containing protein 43 [Arabidopsis thaliana]6085e-061
XP_002864843 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata]5485e-054
NP_201131 zinc finger CCCH domain-containing protein 67 [Arabidopsis thaliana]5306e-052
AAV66094 At5g63260 [Arabidopsis thaliana]5306e-052

Swiss-Prot top hits (Blast detail)Scoree value
Q9STM4 Zinc finger CCCH domain-containing protein 436082e-062
Q5RJC5 Zinc finger CCCH domain-containing protein 675303e-053
Q3ECU8 Zinc finger CCCH domain-containing protein 133279e-030
Q2QT65 Zinc finger CCCH domain-containing protein 663206e-029
Q2R4J4 Zinc finger CCCH domain-containing protein 633134e-028

TrEMBL top hits (Blast detail)Scoree value
B9I3K6 Predicted protein4103e-038
B9IF40 Predicted protein4077e-038
B9RAN9 Nucleic acid binding protein, putative3942e-036
B7F3U0 Putative uncharacterized protein3209e-028
B8BP89 Putative uncharacterized protein3209e-028

Arabidopsis top hits (Blast detail)Scoree value
AT3G48440.1 zinc finger (CCCH-type) family protein6092e-063
AT5G63260.1 zinc finger (CCCH-type) family protein5312e-054
AT1G48195.1 zinc finger (CCCH-type) family protein3278e-031
AT3G06410.1 nucleic acid binding / zinc ion binding3001e-027
AT5G16540.3 ZFN3 (ZINC FINGER NUCLEASE 3); DNA binding / nuclease/ nucleic acid binding3001e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members