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Information for unigene UN53632

FASTA Sequence
Unigene ID: UN53632Length: 744 SSR 
ACAATCATATTGTTTAATCTTTACCCATTTGTTCAAAAAAAAAAAAATCTTCCCTAAATCTCCCTGCCAAAAACCATTTGGCTACC
AAGAGAACAAAACTCATGGAAATTGATTGAAGCTTTTGAAGCCAAAAAAAAGATTAAATCCCAAGAATGAATGATTGCTTACAATG
ATCACCAGTTTAGTATCTTCTCAAACCAGAGAAGTAGAGTCTTGTTTCTGACTTTGAGAACTCTCTCTCTCTCCATAAGTCAAAAA
AACCTTTCTTGTTTCGATTTTCCCGCCATCTGTACCTACATTTGTTTACCCTCTCAAGGAGAAGAATCCACTCAATAGCTTCTGGT
TGGGGTGAGTGGGTCGTAGTCATACGCTTCACCAGCTTTGACAAATCTCCCCTTTACACGCCTTCTCACATCAGCTCTTGCTTTCC
GAGAAGCATACCTCACTCTCTTATCAAACTTGCGAGCCTTCTTCTTTTCTTTGTACCGCATAACCGCGTTATTACGGGTCACTGAA
TGTGAACAAGCATTATTATTATCCTGTGATGATGTTTGAGGATACCATGGTGGCTCTCCCAAGAGCTGCACGGAAGATGATGCACC
ACATTCTTGAAAATCTCCAGCACTACTTTCTCCTGTGACTCCAGAGAATGATATGTTCTTCGACGTGTAGCAAATGATTGGCTCCG
TTTTAGAACTCATGAACGAGTCATTGCTCTCATCTGGCTGCACCGTACTCCCTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882541 hypothetical protein ARALYDRAFT_478095 [Arabidopsis lyrata subsp. lyrata]6202e-062
NP_187422 zinc finger protein CONSTANS-LIKE 9 [Arabidopsis thaliana]6093e-061
XP_002865623 zinc finger (B-box type) family protein [Arabidopsis lyrata subsp. lyrata]4841e-046
XP_002865624 hypothetical protein ARALYDRAFT_357028 [Arabidopsis lyrata subsp. lyrata]4841e-046
NP_199636 zinc finger protein CONSTANS-LIKE 10 [Arabidopsis thaliana]4769e-046

Swiss-Prot top hits (Blast detail)Scoree value
Q9SSE5 Zinc finger protein CONSTANS-LIKE 96153e-063
Q9LUA9 Zinc finger protein CONSTANS-LIKE 104764e-047
Q9LJ44 Zinc finger protein CONSTANS-LIKE 122703e-023
O23379 Putative zinc finger protein CONSTANS-LIKE 112542e-021
Q9C7E8 Zinc finger protein CONSTANS-LIKE 151655e-011

TrEMBL top hits (Blast detail)Scoree value
A1A6H1 AT3G07650 protein6092e-061
B9SF29 Transcription factor, putative4417e-042
B9IAW0 Predicted protein (Fragment)4202e-039
B9GTC7 Predicted protein4141e-038
B7FIW5 Putative uncharacterized protein4041e-037

Arabidopsis top hits (Blast detail)Scoree value
AT3G07650.1 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding6101e-063
AT3G07650.2 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding6101e-063
AT3G07650.3 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding6101e-063
AT3G07650.4 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding6101e-063
AT5G48250.1 zinc finger (B-box type) family protein4773e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members