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Information for unigene UN53640
| FASTA Sequence |
| Unigene ID: UN53640 | Length: 544 |
SSR | | GATCCAAAAGATTAAATTAAACCAAATAATTATACATTCGTCTTTCAGGAACCCATCCCCTATAGTTTTCTTACAGAGTACATATA
TGCTGTTTTGCCCATTCCCAGAAAAAAAAAATCACAAGCAACCAACAAGTAAAACCCATACAAAAAAAAAGTTGTCAAGTATTCAG
TGATGAAAACTGATATACTCCCCCCCCTCTCTCTCTCTTTCGAATATCTTCTTGATTGCCTCAAGAAAACCGTTTCAAACCCGAAT
CTGTATCCGTTACCATTAAAAGTATAAGCTGACATAACAGAAAAAAAACCACAGTACCTACCCTTAGGACTCAAAACTGCTTGCAA
GATTCACCGAGGACACAAATCTTGGGACCAGCTCTGCCTCGTTGGTCTTCGAAGCCGCCAAATCTTCTAACCTCTTCCATGTTTTT
TCCCGGTTTGCTTTAACCTCCGTCTTATTCTCTTCTTCCACTTGGTATTTGGCTAAACACTCATCGAAAAAAGCTTGGTCAATGTC
GGAAAACACTTTCCTCACGTTTAGAGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885457 protein phosphatase 2A B [Arabidopsis lyrata subsp. lyrata] | 290 | 2e-024 |
| BAB02360 protein phosphatase 2A B' regulatory subunit [Arabidopsis thaliana] | 267 | 7e-022 |
| NP_188802 protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] | 267 | 7e-022 |
| CAB10320 phosphatase like protein [Arabidopsis thaliana] | 225 | 6e-017 |
| NP_567464 protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] | 225 | 6e-017 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LVE2 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform | 267 | 4e-023 |
| Q8RW96 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform | 225 | 3e-018 |
| Q9LU89 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform | 154 | 5e-010 |
| Q8LF36 Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform | 149 | 2e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WNY8 Phosphatase like protein | 225 | 4e-017 |
| A5AQF8 Putative uncharacterized protein | 215 | 6e-016 |
| B9SH46 Protein phosphatase 2a, regulatory subunit, putative | 213 | 1e-015 |
| B9IAI9 Predicted protein (Fragment) | 205 | 8e-015 |
| A9PGQ5 Putative uncharacterized protein | 194 | 2e-013 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G21650.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 267 | 4e-024 |
| AT4G15415.2 ATB' GAMMA; poly(U) binding / protein phosphatase type 2A regulator | 225 | 3e-019 |
| AT4G15415.1 ATB' GAMMA; poly(U) binding / protein phosphatase type 2A regulator | 225 | 3e-019 |
| AT3G26020.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 154 | 5e-011 |
| AT3G26020.2 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 154 | 5e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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