 |
Information for unigene UN53700
| FASTA Sequence |
| Unigene ID: UN53700 | Length: 805 |
SSR | | GTAGATTGATAAAAACACCACTTAAATAGTTCTTTTTTTTTTTATATATATAGTTGAAGCAAATAGTTTCAATCTTTTGAGTTCAA
TCAAGAATCTAAAATCCCAACAATTTCTTCAGAGAGCGAGAGACTCTCTCGTTAAGCCTCTCTCCACCTTTCACTGGCTATTAAAC
TCTTCATAGTAATCATCACTTATAACCGCCACAAACCTCTCAAGCCAAGGAAGCTGGTGAAGATCTTTCATGGCTGCTTCAACATA
CGACGACTCTGTAGTACATGGAGGAGGAGGAGGAGGTGGTGGCGACTGATAAGTATGGTGATCACTGAGACTGAACCCTCCACCCG
CCAAGAACCGTTGGATCAGAGCAAGCTGAGATCTTTCTTGCTCAGAGTAAGCGTCCATTACCGTTGGAATTGAGCTGAATGTGTCC
CAAGGCCATTGCTCAAGTTCTTGGATTGTTCTCAGACTCTGAGTTATCTTCATCTTCTTCCTCATCGTCCCAAAAAGCGCATGTGC
AAGTCTGTTGCCCTTCTCTGTACTCTGCTCCACAACAGTAGCAAAACTCATGCCCACATCGACAAGTCATGTGGTTACAGCCTTGA
GCAAGCTCGATCATTATACGGCATTGCTGACACCGTTTCCACCTCTTATACCTAGCCAAGCGATGCAACGTAATATCATCTGGATA
TCTTTCATCAACCGGAAGAATCTGAAACTCTTCACAGCTCATAGAATCGTGCCAAGGAACACCACAGTCCACACACAAACCTCTCG
CATAGTGGACACTTTCACACAACATATATTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867925 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 570 | 1e-056 |
| NP_193702 RING/U-box domain-containing protein [Arabidopsis thaliana] | 561 | 1e-055 |
| BAF00722 hypothetical protein [Arabidopsis thaliana] | 561 | 1e-055 |
| CBI29063 unnamed protein product [Vitis vinifera] | 447 | 2e-042 |
| XP_002273428 PREDICTED: hypothetical protein [Vitis vinifera] | 447 | 2e-042 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0CE10 Putative uncharacterized protein At4g01020, chloroplastic | 135 | 2e-007 |
| Q9NWF9 E3 ubiquitin-protein ligase RNF216 | 122 | 6e-006 |
| Q9SKC4 Probable E3 ubiquitin-protein ligase ARI10 | 121 | 7e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O81849 Putative uncharacterized protein AT4g19670 | 561 | 1e-055 |
| Q0WQ77 Putative uncharacterized protein At4g19670 | 561 | 1e-055 |
| B9ICJ9 Predicted protein | 429 | 2e-040 |
| B9SZ17 Zinc finger protein, putative | 428 | 3e-040 |
| B9NA54 Predicted protein | 427 | 4e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G19670.1 zinc finger (C3HC4-type RING finger) family protein | 561 | 6e-058 |
| AT4G19670.2 zinc finger (C3HC4-type RING finger) family protein | 561 | 6e-058 |
| AT3G45470.1 zinc finger protein-related | 283 | 1e-025 |
| AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein | 277 | 5e-025 |
| AT3G53690.1 zinc finger (C3HC4-type RING finger) family protein | 265 | 1e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
