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Information for unigene UN53709
| FASTA Sequence |
| Unigene ID: UN53709 | Length: 815 |
SSR | | GGGAACAACAAAGTTGAAATTCATAAACATTGATCAGAGTTTGAGCTTTAGTCAATAAGAAAAAAGAAGTTAACATAGTTCGTAAC
ACAGGTTTGGCAACAACAACAACAAAGACAACAATGGTAGTTTATTTTTCCTTTTTCTTACATCAGTTATCACTCTTGACTCTTCT
TCAGTAACACACCGAACTTCTTAAGAATACTCCCATTCTTCTTCTTTGGCGAAGACAAATCATCATCATTAGTTACATCCATATAA
GGAGACATGTTCACGTTCCTCCTCAACGGACTCTCCAGCGATCCTGTTCTCTCCACGTACTTCCCATTACCGTTCTTGTTACCACC
ATCGGAGATCACAGCAGCTGCTGCTTCTGCAGCTTTCCTCCACTGATCACACTGAACCTTGAGTCTCCTTAGCTCAGCTTCTAGCT
CCGTGTTACTGACTTGTGCTGCCCCTAGCTGTTCCGTTGCGTTCTCCGCTCTCTTCCCGCTCTTATCAGCTTCCTCCTTCAGACTC
TCAAGCCTCTCTAAGGCCTCGTCCACAGCCTTGTTCTTCTCTCTCTGCACCTTCTCCATCTCGCTCCTGAAACTCTCGTTCTGTGA
CGTTACACTCTGCAGCTCCATCTCCTTGTCCATCAGATTCCCTCTCAGCTCCACCAGATCGGATTCTAGCTTCTTGAGTTCGCCTG
TAACCTCACGCTCCAAGTTTACTTCTTCTGTTTCTTTGATTTTTAAGTTCAGCAACTCGTTTTCATCGGCTAGTATCCTCAGCTTA
GCTTCCTTATCCATCAAACGTTCATGCAAAGCCTCTCTTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181245 interactor of constitutive active ROPs 2 [Arabidopsis thaliana] | 719 | 7e-074 |
| XP_002323453 predicted protein [Populus trichocarpa] | 498 | 3e-048 |
| XP_002525180 ATP binding protein, putative [Ricinus communis] | 497 | 4e-048 |
| CAC84774 P70 protein [Nicotiana tabacum] | 494 | 9e-048 |
| XP_002326334 predicted protein [Populus trichocarpa] | 473 | 2e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZQC5 Interactor of constitutive active ROPs 2, chloroplastic | 719 | 3e-075 |
| Q9LSS5 Interactor of constitutive active ROPs 3 | 361 | 1e-033 |
| Q9M9F9 Interactor of constitutive active ROPs 4 | 245 | 3e-020 |
| Q8LE98 Interactor of constitutive active ROPs 1 | 205 | 1e-015 |
| Q8VYU8 Interactor of constitutive active ROPs 5 | 156 | 6e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9IJ05 Predicted protein | 498 | 2e-048 |
| B9SGR1 ATP binding protein, putative | 497 | 3e-048 |
| Q8VXD2 P70 protein | 494 | 6e-048 |
| B9MT88 Predicted protein | 473 | 2e-045 |
| B9T1Y2 ATP binding protein, putative | 459 | 7e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G37080.1 myosin heavy chain-related | 720 | 2e-076 |
| AT5G60210.1 LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT2G37080.1); Has 77946 Blast hits to 39215 proteins in 1793 species: Archae - 845; Bacteria - 8877; Metazoa - 39997; Fungi - 6049; Plants - 2988; Viruses - 248; Other Eukaryotes - 18942 (source: NCBI BLink). | 362 | 8e-035 |
| AT1G78430.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: tropomyosin-related (TAIR:AT1G17140.2); Has 36552 Blast hits to 19717 proteins in 1278 species: Archae - 377; Bacteria - 3766; Metazoa - 19812; Fungi - 2701; Plants - 1105; Viruses - 197; Other Eukaryotes - 8594 (source: NCBI BLink). | 245 | 3e-021 |
| AT1G17140.1 tropomyosin-related | 205 | 1e-016 |
| AT1G17140.2 tropomyosin-related | 205 | 1e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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