Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN53721

FASTA Sequence
Unigene ID: UN53721Length: 782 SSR 
GCCTCCTTTAATGGTTGTTGTTGTGTGTCATGTTTGAGTAGCTATGTGGAGTGAGAGGAGGTGGGAACGCGGCAGCTCAGGCAGTG
TATTGGCAGGCAAAGAAAGGAGTGTCCTTTGTGGTAGCTTTTGAATCTGAGAGAGAGAGAAACGCTGCCATCATGCTTGCGCGCAG
ATTCGCTTGTGATTGCAATGTGAGTTTAAACAACAAGAAAAGAAAGAAAGATTTGAGTTGTTGTTTTTGATTCTGAGTCTTGAAAC
GTATGTGTGTGTTGTTTGCAGGTGACGCTTGCTGGCCCAGAGGACAGAACAGAGACCAGTCCTAACTAAGAGGTTTTATGTTTTGT
AGTTTTATATAATATAGGGGGGCTTTAGGGATTTGTTTGAACTGCAGTTTCTTGTCTGTTTTGTGTGTGTAAAAAAATGAAGAAAG
AATCAGTGAAGATGTTGAATCTCTCTCTCTATATGACGGGTGGTTTGTTTCCGTTGACGTATCTTACTATTGAGGAGCATAACGGA
TGTGTTTTATTTATTTACTAACGATGTTAAATTCAAATACAATCGGAGGAGAAACTGAAGAAGTTGCATAGGTTCCATGTAAAACC
AAACAAATAAAAAAAAAAAAGAGGAAGAAAATCACAAAGAGATCATGACAGCTACATGATCAAACAAGAGAGTATATAGTCCCTTT
CTGGAGCAGAGTCCCTTAACTTCATCAGCATTTTCACGCTCTCCCTGCAATCCAAACTAGAATCCATTATTAGCAGCATTCGAAGT
ATCTATCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180245 plectin-related protein [Arabidopsis thaliana]2672e-021
XP_002880833 hypothetical protein ARALYDRAFT_481549 [Arabidopsis lyrata subsp. lyrata]2672e-021
CAN69648 hypothetical protein VITISV_043238 [Vitis vinifera]2456e-019
XP_002299966 predicted protein [Populus trichocarpa]2412e-018
XP_002269709 PREDICTED: similar to plectin-related [Vitis vinifera]2412e-018

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O48791 Putative uncharacterized protein At2g267702671e-021
A5B3P0 Putative uncharacterized protein2454e-019
B9GFS8 Predicted protein2411e-018
B9HNJ6 Predicted protein2383e-018
B9SB74 Transcription factor, putative2383e-018

Arabidopsis top hits (Blast detail)Scoree value
AT2G26770.1 plectin-related2677e-024
AT2G26770.2 plectin-related2677e-024
AT2G40820.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT3G56480.1); Has 2697 Blast hits to 2260 proteins in 261 species: Archae - 3; Bacteria - 96; Metazoa - 995; Fungi - 432; Plants - 786; Viruses - 39; Other Eukaryotes - 346 (source: NCBI BLink).1871e-014
AT3G56480.1 myosin heavy chain-related1711e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members