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Information for unigene UN53768

FASTA Sequence
Unigene ID: UN53768Length: 779 SSR 
GATTACCAAAACTAAAATCGACATCAAAACAAAAAAAGCTCTCGGTTTACTCTACCCTCTGCGATTGTCTCTCCGACAAACCCTAA
TTTAGAAAGGGAAAGAAAGAGAGGGGTTTCAGTTAATTCCTCTAAATCTCGGTCTTATCATTTGGGTTAAATGGATTCCGAAGAAG
ACATGCTCGATGCGCACGATATGTATTCAGGGGAGGATGATTTCTACAGCGATGATTACAAGGATAGCGATGTTGATGGTGATGAT
GATGATGATGGGGAACCTGATTACGGCTTTGTTGAGGAAGACGCTGACGATTCTGCCATGATCGCCTCTCATAGCTCTCAGAAAAA
CTTTAGTGTTCTGAGGGAAGAAGATATTCTGAGGCACCAGAGGGATGCTATTGAGCGAGTTTCTGTCGTCCTCTCTATTACTCAAG
TCGAAGCCAGTATTCTGCTTCGTTACTTCCACTGGAGTGTTGGTAAAGTTCATGATGAATGGTTTGCTGATGAAGAGAGAGTCCGG
AATACTGTGGGCATATTAGAGAGACCTGTTGTTCCACCATCTGTTGACACTGAACTTACATGTGGAATCTGTTTCGATCCTTACCC
TCCTGAGAAGATTGCTTCGGTTTCTTGTGGCCATCCTTTCTGCACTACCTGCTGGACAGGTTATATCAGCACAACTATTAATGACG
GCCCGGGATGTTTGATGCTAAGATGTCCTGACCCATCTTGTCTAGCTGCTGTTGGTCATGATATGGTTGACAAATTAGCGTCTGAA
GAAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881179 hypothetical protein ARALYDRAFT_902186 [Arabidopsis lyrata subsp. lyrata]9365e-099
NP_180709 putative E3 ubiquitin-protein ligase ARI7 [Arabidopsis thaliana]9321e-098
AAD24830 putative RING zinc finger protein [Arabidopsis thaliana]9321e-098
XP_002889573 hypothetical protein ARALYDRAFT_470601 [Arabidopsis lyrata subsp. lyrata]7781e-080
AAF29394 Contains similarity to Ariadne-2 protein from Drosophila melanogaster gb|AJ010169 and contains an IBR PF|01485 and a zf-C3HC4 (RING finger) PF|00097 domain. ESTs gb|AA585849, gb|T42014 come from this gene [Arabidopsis thaliana]6883e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q84RR0 Probable E3 ubiquitin-protein ligase ARI79523e-102
Q8L829 Probable E3 ubiquitin-protein ligase ARI56881e-071
P0C8K8 Putative E3 ubiquitin-protein ligase ARI66631e-068
Q8W468 Probable E3 ubiquitin-protein ligase ARI85832e-059
Q9SKC2 Probable E3 ubiquitin-protein ligase ARI115383e-054

TrEMBL top hits (Blast detail)Scoree value
B9HYH6 Predicted protein6424e-065
A5C6J4 Putative uncharacterized protein6343e-064
B9HHY6 Predicted protein6272e-063
B9HH71 Predicted protein6236e-063
B9MY13 Predicted protein6192e-062

Arabidopsis top hits (Blast detail)Scoree value
AT2G31510.1 IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7)9523e-103
AT1G05890.1 zinc finger protein-related6881e-072
AT1G65430.1 zinc finger protein-related5832e-060
AT2G31780.1 protein binding / zinc ion binding5383e-055
AT2G31760.1 zinc finger protein-related5241e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members