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Information for unigene UN53773

FASTA Sequence
Unigene ID: UN53773Length: 848 SSR 
GGGGATTGGCCTCTTTGCATATCTGCTCTTAGAGCTGTCCGGTTTTGCAATCGGATCCCCTCTTCTCCATCGAAGCTTTTTGGCTT
TGAATTGGATTTGGGGTTTCAAAGCCACCTCCTTTTTCTTCTTATCATTATCCTTGTGGAGAAATCAAGACACAAGCAGAGAGATA
TGCAGGACCAGCTAGTGTGTCATGGCTGTAGAAATACATTGATGTATCCTAGAGGAGCTACGAACGTCCGTTGTGCGTTATGTCAC
ATTGTCAACATGGTTCCTCTTCATCCTCCTCCTCCTCCTCATCACCATGCTGCTCATGCAGGGATGGACATGGCTCACATTGTGTG
TGGTGGTTGTCGAACAATGCTTATGTATACCCGTGGGGCTACTAGTGTAAGATGCTCTTGCTGTCAGACTGTCAACCTTGTCCCAG
GACCCCCGCCGTCTAATCAGGTTGCTCATATCAACTGTGGGAACTGTAGGACGACACTCATGTACCCTTACGGTGCATCATCTGTT
AAATGCGCTATTTGCCAGTTTGTTACTAACGTTAACGTGAGCAATGGAAGGGTGCCTTTAGCAAGCAACCGGCCAAATGGAACAGC
CTCTCCCGGGACTATGCCCTCTACATCCACTCAGTCAACACCACCGTCTCAGACACAAACTGTTGTAGTAGAGAACCCAATGTCCG
TTAATGAAAGTGGAAAGTTGGTGAGCAACGTTGTAGTTGGAGTGACAACAGGCCAAAAATAACTTTTAAGAATGATTGATCTAAAG
ATCAATTCCATTTCGTCTATCCCTGCGTCTGGTTTGTGCATATTTACATACTGTATGACATTTTTTTTTTTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADK63407 zinc finger protein [Brassica rapa]10128e-108
AAL50981 zinc finger protein LSD1 [Brassica oleracea]9885e-105
AAL50982 zinc finger protein LSD2 [Brassica oleracea]9213e-097
NP_849549 zinc finger protein LSD1 [Arabidopsis thaliana]7905e-082
XP_002869934 hypothetical protein ARALYDRAFT_492829 [Arabidopsis lyrata subsp. lyrata]7743e-080

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8W195 Zinc finger protein LSD19883e-105
Q8W194 Zinc finger protein LSD29212e-097
P94077 Zinc-finger protein Lsd18021e-083
Q8RXL2 Putative zinc-finger protein Lsd17842e-081
C0Z316 AT4G20380 protein7591e-078

Arabidopsis top hits (Blast detail)Scoree value
AT4G20380.2 zinc finger protein (LSD1)8036e-086
AT4G20380.7 zinc finger protein (LSD1)7973e-085
AT4G20380.1 zinc finger protein (LSD1)7955e-085
AT4G20380.3 zinc finger protein (LSD1)7892e-084
AT4G20380.4 zinc finger protein (LSD1)7892e-084

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members