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Information for unigene UN53780

FASTA Sequence
Unigene ID: UN53780Length: 710 SSR 
GAGACTCAGCAGCTGCAGCAACAGACTCAGCAGCAGCAGCAGCAGCAGCAGCAAATACAACAACAGCAGCAGTTAAGATCGCAGCA
ACTGCAATCTCAGCCACAGTCACAGCCTCAACATATGTTGCAGCAATTTCAGCTTCCGCAGAATCAGCTTTATAATGGTCAACAAG
CAGCGCGGCAGCATCAGACGCAACAAGCATCTATGCATCATTTGCAACCCCAAGTAGTTTCGGGATCAATAGCAAGCAGTGTCATC
GCACCTCCTTCTAGCTCCCTTAATCAAAGCTTCCAGCAGCAACAACAGTCTACGCAGCCTCAACACACACATCGCCACATAGGTGG
TAGCACTAGCCAGAGTAGTGTAATTGAAACTAGCAAGTCTTCATCTAATCTGATGTCCAAACCACCGCAAGATACACAGTTTTCAC
GACAAATGGAACAGCAACAGCCTTCTAGTCTTGTCCAGGGACACAATCAGCAAACACTCGTGCAGCAGAAAACTCAACAGTCACAG
GTTCAACAAAGATTCCAGCAGAGTCTCTTGGAACAACCGCATTTACAGTTTCAGCTGTTGCAGAGGTTACAACAGCAGCAACAGCA
ACAGCAGCAGCAGCAGCAATTTCTTTCCCCGGGAAGCTCGAGTTTGCAGTCTCAGTTACTCCACCAACAGCTGCAAAGCCAGCAGT
TGCAACAGCTACCTTCTATCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874012 hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp. lyrata]7672e-079
NP_851047 auxin response factor 7 [Arabidopsis thaliana]7626e-079
NP_851046 auxin response factor 7 [Arabidopsis thaliana]7626e-079
NP_568400 auxin response factor 7 [Arabidopsis thaliana]7626e-079
AAD04807 BIPOSTO [Arabidopsis thaliana]7626e-079

Swiss-Prot top hits (Blast detail)Scoree value
P93022 Auxin response factor 77623e-080
Q55F68 Adenylate cyclase, terminal-differentiation specific3043e-027
Q54VY3 Putative uncharacterized protein DDB_G02800653026e-027
Q86AF2 Putative uncharacterized protein DDB_G02716062793e-024
Q75BI6 Mediator of RNA polymerase II transcription subunit 152085e-016

TrEMBL top hits (Blast detail)Scoree value
A7RLU4 Predicted protein3422e-030
A0NFH8 AGAP004734-PA2794e-023
Q867Z5 Gag protein2769e-023
B4MF55 GJ181332606e-021
C9QHI2 TPR domain protein in aerotolerance operon2151e-015

Arabidopsis top hits (Blast detail)Scoree value
AT5G20730.1 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator7623e-081
AT5G20730.2 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator7623e-081
AT5G20730.3 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator7623e-081
AT1G25540.1 PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator2013e-016
AT1G25540.2 PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator2013e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members