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Information for unigene UN53845
| FASTA Sequence |
| Unigene ID: UN53845 | Length: 653 |
SSR | | CGCTCTCCACTTTTATCTCAATTATTAACAAAGAAAAAAAAACCCTAATTTCGATTCAATTCGCGATCGGACCCCTATCGCAATCG
ACGGAGAGAGAGAGATTAGAGACGGAGGCGATGGATTTCGATTCCAACGGAGGACCCGGGTTCAACAACGGGAATAGTAATAACAA
CAACACGTGGGGGAGGTTCGGTGGGAACAGGACGGTTTTGACGAAGACTGAGAAGGTTTGCAGGTATTGGGTGGATGGGAGCTGTA
GCCACGGCGACAAGTGTAGGTTCTTGCATTGCTGGAGCAAAGGAGAGGGGTTCGCGTTGCTGACTCAGCTCGATGGGCATGAGAAG
CTTGTGAGTGGGATCGCTTTGCCTGCTGGATCTGATAAGCTTTACACTGGGAGTAAAGATGGGACTATTCGTGTCTGGGACTGTGC
TTTTGGACAGTGTACAAGCGTACTCAATCTAGGTGCGGAAGTTGGGTGTGTGATTAGTGAAGGCCCTTGGCTATTGGCTGGCATGC
CAAATCTTGTCAAGGCTTGGAATATGGAAGCGAATGTAGACCAGAGTCTGAGTGGACCTGTTGGCCAAGTGTATTCTCTTGTTGTG
GGTACTGATCTACTCTTTGCTGGCACACAGGATGGTTCTATATTGGCATGG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_200011 zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] | 793 | 1e-082 |
| NP_001032059 zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] | 793 | 1e-082 |
| XP_002865885 hypothetical protein ARALYDRAFT_495266 [Arabidopsis lyrata subsp. lyrata] | 789 | 4e-082 |
| NP_194274 zinc finger CCCH domain-containing protein 48 [Arabidopsis thaliana] | 753 | 5e-078 |
| CAA18182 putative protein [Arabidopsis thaliana] | 753 | 5e-078 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9FNZ1 Zinc finger CCCH domain-containing protein 63 | 793 | 6e-084 |
| Q9FNZ2 Zinc finger CCCH domain-containing protein 48 | 753 | 3e-079 |
| Q0DYP5 Zinc finger CCCH domain-containing protein 17 | 554 | 3e-056 |
| Q9FE91 Zinc finger CCCH domain-containing protein 62 | 431 | 6e-042 |
| Q9FKR9 Zinc finger CCCH domain-containing protein 59 | 430 | 7e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I4E6 Predicted protein | 681 | 8e-070 |
| B9R9H9 F-box and wd40 domain protein, putative | 676 | 3e-069 |
| B9ID21 Predicted protein (Fragment) | 617 | 2e-062 |
| B7ET05 cDNA clone:J033090J15, full insert sequence | 554 | 4e-055 |
| B8AGT0 Putative uncharacterized protein | 554 | 4e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G51980.1 WD-40 repeat family protein / zfwd2 protein (ZFWD2), putative | 793 | 6e-085 |
| AT5G51980.2 WD-40 repeat family protein / zfwd2 protein (ZFWD2), putative | 793 | 6e-085 |
| AT4G25440.1 ZFWD1 (zinc finger WD40 repeat protein 1); nucleic acid binding / zinc ion binding | 753 | 2e-080 |
| AT5G49200.1 WD-40 repeat family protein / zfwd4 protein (ZFWD4) | 431 | 5e-043 |
| AT5G40880.1 WD-40 repeat family protein / zfwd3 protein (ZFWD3) | 430 | 7e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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