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Information for unigene UN53854

FASTA Sequence
Unigene ID: UN53854Length: 760 SSR 
GGGAGATTCGCTGTCTTAAATTTCACTAACCTCTCATCTCTCTCTCTCTCACTTGTACGACTTCTCTTTGCAAAAATGGCGAAACT
AGCGATGCTGTTGGCTCTCTGTATCTTACCGGCGATAGCCATGGCGGCGAAGGTGCCACGTATCGGTAAGAACACGTTGGTGGTTC
AAGGTATCACTTACTGCGACACTTGCAAGTTCGGCTTCGAGACTGCTGAATCCTCCTACCCCGTCCCCGGTGCGACGGTGAAGCTT
TCGTGCAGAGACAGGAAGGCAATGAAAGAGTTATACACAGACGTAGCTGTATCAAACAGGAAGGGAAAGTACATGTTCGTTGTCCA
CGAGGGCCATAAAGACGAGATGTGCGATGTTATGCTCGTCAAAAGCTCAGACAAGGGTTGTTCTAAAATCTCGAGGGGGCGTGAAC
AGTCGCGTGTGATATTGAACCATTACAATGGCATTGCGTCGCAGATCAGGCACGCTAACAACATGGGGTTTGAGAAAGATGTTTCT
GATGTGTTTTGCTCTGAGTTGATTAAGAAGTATCAGGTTGATGAAGATGAGGTTTAGAGAGACCCATCTTTAATCAGTGTCATGAT
GGTCTGTTGTTTTCTATTTGGTTATGGGAGAGATATATTTGTATTTTCTTGATATAATATTATTTGTTCTTAGATGATGATGAGGA
TGACTCCGATGGGAACTCTTGTTTGTTTAAGTTTGTTCTATTGGTATATGTTCACTTCACTGGTGGAATGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177927 pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]6821e-069
XP_002889170 pollen ole e 1 allergen and extensin family protein [Arabidopsis lyrata subsp. lyrata]6642e-067
AAF17689 F28K19.26 [Arabidopsis thaliana]6264e-063
AAN60344 unknown [Arabidopsis thaliana]6183e-062
XP_002887714 pollen ole e 1 allergen and extensin family protein [Arabidopsis lyrata subsp. lyrata]5952e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q8LGR0 Pollen allergen Che a 12337e-019
O49813 Olee1-like protein2283e-018
P13447 Anther-specific protein LAT522184e-017
Q7M1X5 Major pollen allergen Lol p 112085e-016
Q8H6L7 Pollen allergen Phl p 112042e-015

TrEMBL top hits (Blast detail)Scoree value
Q8LD45 Allergen, putative6829e-070
Q9SGZ6 F28K19.266263e-063
Q8H789 Putative uncharacterized protein (Fragment)6182e-062
Q42043 Pollen specific protein (Fragment)4972e-048
A9P9E0 Putative uncharacterized protein3825e-035

Arabidopsis top hits (Blast detail)Scoree value
AT1G78040.1 pollen Ole e 1 allergen and extensin family protein6825e-072
AT1G78040.2 pollen Ole e 1 allergen and extensin family protein6825e-072
AT4G08685.1 SAH73743e-036
AT5G10130.1 pollen Ole e 1 allergen and extensin family protein2605e-023
AT4G18596.1 pollen Ole e 1 allergen and extensin family protein1961e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members