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Information for unigene UN53864

FASTA Sequence
Unigene ID: UN53864Length: 877 SSR 
GGGACTAAAACAAAAAAACAATAATTAATTTACAGAGAGAGAGAGAGAGCAGTGATGGCGGATGGTGATCTGGAGAACAGAATGTC
GGCGAAGCATCACCGAGGGATCGGAAGCAAAGGCGTTGATCGGACCGGATTCGGTCCCCCGCCTAGACCTGCGCCGTTGGTGTACT
CTGATTTAACCGGCGAAGACGTCGCTTCTTCTTCGTGGACGTCGTGGCTTGTTCCGATGTTCGTCGTCGCTAACGTGATGGTCTTC
GTCGTTACGATGTTTGTCAACAACTGTCCCGCGCATTCTCACGGTCCTAACCGCCACTGTGTCGCAGAGTTCCTCGGGAGACTCTC
CTTCGAGCCTCTCCGTAACAATCCTCTCTTCGGTCCCTCTTCTCGCACATTGGAGAAGTTAGGATCACTTGAGTGGGACAAAGTTG
TGGAGAAGCATGAAGCTTGGCGTCTCTTGACTTGTATATGGTTACACGCCGGTGTTATTCATCTTGCTGCTAATATGTTAAGCCTT
GTCTTCATCGGTATACGCCTTGAGCAGCAATTTGGCTTCGTTAGGATTGGAGTTATATACTTAATGTCTGGAATGGGAGGAAGCAT
CTTGTCTTCTCTGTTTATCAGAAACAGTATCTCTGTTGGAGCTTCTGGTGCTCTTTTTGGACTTCTTGGTTCAATGCTTTCTGAAC
TTCTCACCAACTGGACTATCTACTCTAACAAGGTTCATCTCTCAATGCTAATAACATATTAGCAATGTGCCTCTTGTTTGTTAACG
ACCCCTTTTTGTGTGTGTGTGTGTTGTGTGTGGACAAGTAAGATTGCGGCACTTTTGACGCTTTTGTTTGTCATTGCGATAACCTG
GCCATCGGGATTCTACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196342 RHOMBOID-like protein 3 [Arabidopsis thaliana]9071e-095
NP_001119182 RHOMBOID-like protein 3 [Arabidopsis thaliana]9043e-095
XP_002873304 rhomboid family protein [Arabidopsis lyrata subsp. lyrata]8981e-094
XP_002318821 predicted protein [Populus trichocarpa]7342e-075
XP_002321905 predicted protein [Populus trichocarpa]7304e-075

Swiss-Prot top hits (Blast detail)Scoree value
P54493 Rhomboid protease gluP1916e-014
Q6IUY1 Rhomboid-like protease 31916e-014
A0JPA1 Rhomboid family member 21665e-011
Q9NX52 Rhomboid-related protein 21649e-011
Q19821 Rhomboid-related protein 11631e-010

TrEMBL top hits (Blast detail)Scoree value
Q9LYP1 AT5g07250/T28J14_1909079e-096
B3H7G3 Uncharacterized protein At5g07250.29042e-095
B9I4A7 Predicted protein (Fragment)7341e-075
B9ID63 Predicted protein7303e-075
B9GWE6 Predicted protein7269e-075

Arabidopsis top hits (Blast detail)Scoree value
AT5G07250.1 ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)9075e-098
AT5G07250.2 ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)9041e-097
AT1G63120.1 ATRBL2 (Arabidopsis thaliana Rhomboid-like 2); serine-type endopeptidase7203e-076
AT2G29050.2 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)6737e-071
AT2G29050.1 ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)6405e-067

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members