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Information for unigene UN53914

FASTA Sequence
Unigene ID: UN53914Length: 690 SSR 
GGAAGGAGAAAGCGACAACGAATTCTTCAGAAATTTGCCCTCAATGGAATCAAAATCGACGTCTGGTGGTGGTGGTGGTGTTGTCC
GTCGCCAATGTACTCTGTCGAGATATGATCCATACGCAGTAGTGACAGAGAATAATAATAAGGTCGACCACATGAAAGAAGGGGTT
GTACAACTTGGAGTTGAGCTTTCACTCTGTGTAGCTGAATCCATGTTTCTCCTGTGCGACGACAGGAAGATTATGTTGTTGTTCTG
CTTTATGATATGTAAAAATTCAGACGACCCTGTGTCGGAAAGGCTGATTCGTGTGATGCATCATGTCTACACTAATGAGATCATAT
CCAAGAACAGACTGCATCATCAGGATAAAAAGATTTGTCCCAACTCGGTCCATTGTGGAGTGATCGGGAAAGCATGGGAAGATTTT
GCTTACGGACTCCGATTCCTGCATCGCCTCACTAAGCTTTTCAGAACGCAACGTTTCCCTTTCAGATATCCTCTATTATCGAACAT
GGATACTGCAGATATCAAGCGGCACTTGATCAAGAAGATAGAGGCTAAACTGAGGTCTTCAAAAGATGTTTCCCAGGCGAATGGGT
TTGAGAGGGAGACGTTAGAGCCTACCGTTTCCGAAACGTGGATGTCTCTCTTTGATGAAGAAGCTGTCCAAGCAAAGCCACAAAGA
TT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873400 predicted protein [Arabidopsis lyrata subsp. lyrata]3711e-033
XP_002887884 hypothetical protein ARALYDRAFT_892963 [Arabidopsis lyrata subsp. lyrata]3692e-033
XP_002883015 hypothetical protein ARALYDRAFT_897979 [Arabidopsis lyrata subsp. lyrata]3558e-032
XP_002893868 hypothetical protein ARALYDRAFT_336605 [Arabidopsis lyrata subsp. lyrata]2591e-020
BAB02536 unnamed protein product [Arabidopsis thaliana]2411e-018

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LK87 Emb|CAB53649.12411e-018
A0MEB0 Putative uncharacterized protein (Fragment)1792e-011
Q1PFP0 Putative uncharacterized protein1792e-011
Q3ED12 Putative uncharacterized protein At1g35365.11352e-006

Arabidopsis top hits (Blast detail)Scoree value
AT3G27900.1 unknown protein2416e-021
AT1G35365.1 unknown protein1351e-008
AT1G34560.1 unknown protein1153e-006
AT1G35400.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1184 (InterPro:IPR009568), Uncharacterised conserved protein UCP031143 (InterPro:IPR016970); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35410.1); Has 12 Blast hits to 10 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1118e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members