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Information for unigene UN53926

FASTA Sequence
Unigene ID: UN53926Length: 653 SSR 
GGATATGTTGTTAGTTCTCGAATAGACATCATGCTTTAGCTTTTTTTGGAACTTCATGTAATAGATAGATCTGTGAATGGATGGTT
TATGTTGCTTAGACAAGTTTTGGAATTTCATGTAATAGATCCTAACTGAATCGATCTGAAGGCTGTTGCGTATCTGTTTAGTAACT
GTTTGTGTGTGTGTGTTTTTTTCTCAGCGGCTGAGACAGGTCTGTTCTGGGACAAGGATGAATGCGAGATCACTAATGCATCCAGA
GCTGCTCAGGTTTTGAAGAACATGAGAAAAGCCCTTGTCGGTGGTGGTCATATTGGTCCAGCCACATTCCACGCTTATGGTGATAT
GACCGGTCTTGACTTCCAGTCAACCGACATCAAGCTCAATCATTTTCCCGCAGGAGAGAAGAATGCGAGACACACCAAAATGTTGG
AGGACATTGTGGCTTGGGCAGCGGAGCATCCTGAGCCATCGACGCTGATGCTAGTGATGAGTGACGTCTCACGAGACTTTCTCGAT
GTTGTTGATGTTTTGACTACCAAGAAGAATTACAGGTTCATTTCAGTGCTTCCAGATCCACCACGACCACCACCAAGGCCAATGAT
GCTGCTTATAGTGCCCAATGATTCTTGATTCTCAGCTGATTCCAGTGGCTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567124 Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana]4158e-039
AAM63906 unknown [Arabidopsis thaliana]4158e-039
CAB71865 hypothetical protein [Arabidopsis thaliana]4051e-037
XP_002876652 hypothetical protein ARALYDRAFT_907765 [Arabidopsis lyrata subsp. lyrata]3942e-036
NP_001060400 Os07g0637200 [Oryza sativa Japonica Group]2123e-015

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
A6QR85 At3g620504156e-039
Q8LC17 Putative uncharacterized protein4156e-039
Q9M1R9 Putative uncharacterized protein T17J13.104058e-038
A2YP33 Putative uncharacterized protein2122e-015
Q7XIX3 Os07g0637200 protein2122e-015

Arabidopsis top hits (Blast detail)Scoree value
AT3G62050.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF537 (InterPro:IPR007491); BEST Arabidopsis thaliana protein match is: EDA32 (embryo sac development arrest 32) (TAIR:AT3G62210.1); Has 114 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4154e-041
AT3G62210.1 EDA32 (embryo sac development arrest 32)1932e-015
AT5G61190.1 zinc finger protein-related1932e-015
AT3G62200.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF537 (InterPro:IPR007491); BEST Arabidopsis thaliana protein match is: EDA32 (embryo sac development arrest 32) (TAIR:AT3G62210.1); Has 3380 Blast hits to 2820 proteins in 272 species: Archae - 0; Bacteria - 93; Metazoa - 1555; Fungi - 720; Plants - 473; Viruses - 42; Other Eukaryotes - 497 (source: NCBI BLink).1896e-015
AT5G64710.1 unknown protein1512e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members