 |
Information for unigene UN53939
| FASTA Sequence |
| Unigene ID: UN53939 | Length: 815 |
SSR | | GTGATTTCGTCTAACTCATCACCAGCTGCTGCAGCCGCTGCTTCAGGAGGAGGAGGAGGAGGAGGACAGGTTGGTGTTGTTCTTCA
GAGGTCGACGAGCTGCACTACCGCGCCGGAGCTGGCTGAGGAGAACGAGAGGTTGAGGAAAGAGAATGTTCAGTTGAGTCAAGAGC
TGACAAAGCTTAAAGGGTTGTATTCGAATATCTACACGCTCATGTCCAACTTCACGTCTGGTCAAGCTGAGGGGAAAGCATTGGAT
CTAATGCCGGAGAGACAAGAGGTGAGTGAAGACATCGTAACGGCTTCTGGATCAGAAACAGGGATTGGTCTGAAGCTAGATGAGGA
TCTGACACCGAGGTTGTTTGGAGTTTCGATTGGGGCGAAGAAGCGAGCTAGGAGAGACGAGTTGGTTACTGCAGAGGAAGAAGAGG
ATGATGAGAGACGAGAAGGGAGTAACCAAGAGGGAGGAGGAGGAGAGCAAGGCTCTGATGTTAATAAGTCAGAGCCTATGGAGTAG
GATAATAACTCTGATGACCAAAATGGGCCATGGCTTGAACTCGGAAACTGAAAAAGTTTTACCGAGAAGAGGTCACTGGTTTCCGA
ATAGACAAGCTTTTGAGCTGACACGAACAGGAAATTGAAGCAGTGTTTGGTTATCAGAACAGAGACTCTGAAGTTTCACAGTTTAG
AGAACAAAGATTCATTTGTTTGGGGTTACAAAATAAACGCAGATCCTTACTACCATCCTGAGTTGTTCCTGATCTCTGATGTTGCA
TCTTGAATCTTCTTCTTGATGGAACTAAACTACTCTGGCTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB63803 heat shock factor 7 [Arabidopsis thaliana] | 583 | 4e-058 |
| NP_192903 heat stress transcription factor B-2b [Arabidopsis thaliana] | 583 | 4e-058 |
| XP_002872608 hypothetical protein ARALYDRAFT_911518 [Arabidopsis lyrata subsp. lyrata] | 559 | 3e-055 |
| XP_002509743 Heat shock factor protein, putative [Ricinus communis] | 318 | 2e-027 |
| XP_002298053 predicted protein [Populus trichocarpa] | 313 | 9e-027 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9T0D3 Heat stress transcription factor B-2b | 583 | 2e-059 |
| Q9SCW4 Heat stress transcription factor B-2a | 166 | 4e-011 |
| Q652B0 Heat stress transcription factor B-2c | 129 | 9e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RC59 Heat shock factor protein, putative | 318 | 2e-027 |
| B9GKL4 Predicted protein | 313 | 6e-027 |
| A5AK60 Putative uncharacterized protein | 269 | 8e-022 |
| D3Y3F4 HSP transcription factor | 268 | 1e-021 |
| B7FM72 Putative uncharacterized protein | 199 | 1e-013 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G11660.1 AT-HSFB2B; transcription factor/ transcription repressor | 584 | 1e-060 |
| AT5G62020.1 AT-HSFB2A; DNA binding / transcription factor | 166 | 4e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
