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Information for unigene UN53963

FASTA Sequence
Unigene ID: UN53963Length: 724 SSR 
GGAGCTTCCATCGAGAAAGATTGTTCCTGTCTCCGACGACAAACCAGACCTACGTGCGACAGATAGAGGGACAGAAAAATGGGTTT
CTTCTCGTTTCTCGGAAGAGTTCTCTTCGCTTCTCTATTCATCCTCTCCGCTTGGCAAATGTACAGTGACTTTGGATCTTACGGTG
GTCCAGCAGCTAAAGAGTTGGCTCCAAAGCTTCACCTGACCAAAGCACATCTCTCTTCCAGATTAGGAGTAGCATTGCCCGACATT
GAGGTGAAACAAGTCGTATGGGCAATTGTTGCTCTGAAAGGACTCGGAGGCTTACTCTTTGTTGTTGGCAACGCCCTTGGTGCCTA
TCTTCTGGCTTTCTACTTGGTGGTCGTTAGCCCCATCTTATATGATTTCTACAACTATGGACCTCAGGACCGCGAGTTCTCTCTTC
TCTTTACTGAGTTTTTGCAGAGCGTTGCGCTTCTTGGGGCATTGCTGTTTTTTATCGGAATGAAGAATGCAACGACAACCTCCTCC
TCCTCCTCCCAGAGGAACCTGAAGAAGAGGATACCCAAGCCTAAAGCTGCTTAGAGTTCTTCTTCTAGTCTCTTCCGCACAAATGT
GTTGAGGCTTTTAGACCATCTCCAATGGTTTACTCTATTTTAGAGTAGATTTTACACTAAAATAGAGTAATTCTAAAATAAAGTGA
AATTTCTCTCCAATGGTTTACTCTATATTTCACTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_171929 HR-like lesion-inducing protein-like protein [Arabidopsis thaliana]6712e-068
XP_002892210 hypothetical protein ARALYDRAFT_887596 [Arabidopsis lyrata subsp. lyrata]6542e-066
ACG24094 nicotiana lesion-inducing like [Zea mays]6238e-063
NP_001147050 nicotiana lesion-inducing like [Zea mays]6131e-061
XP_002862554 hypothetical protein ARALYDRAFT_497403 [Arabidopsis lyrata subsp. lyrata]5905e-059

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O22690 At1g04340/F19P19_236711e-068
B6SGW1 Nicotiana lesion-inducing like6235e-063
B6SK94 Nicotiana lesion-inducing like6138e-062
Q8LBI4 Nicotiana lesion-inducing like5878e-059
Q9LSW5 AT5g43460/MWF20_185716e-057

Arabidopsis top hits (Blast detail)Scoree value
AT1G04340.1 lesion inducing protein-related6923e-073
AT5G43460.1 lesion inducing protein-related6208e-065
AT4G14420.1 lesion inducing protein-related4173e-041
AT3G23190.1 lesion inducing protein-related1261e-007
AT3G23180.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: HR-like lesion-inducer (InterPro:IPR008637); BEST Arabidopsis thaliana protein match is: lesion inducing protein-related (TAIR:AT3G23190.1); Has 68 Blast hits to 68 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1153e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members