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Information for unigene UN53987
| FASTA Sequence |
| Unigene ID: UN53987 | Length: 679 |
SSR | | GGCAATTATAGCTCCTCACTTCCTCTCTGGCTCTGTCTGCTCCGGTGATATAGATATCTCTAGAAAGAGAGAGAGAGAGAGAGAGA
GAGTGCTAAAATTCATGTGAGAGAATTTTCTTCCGTTATTTTCTCTTTCCAAAACACAGTTCCACACATTGTCTGAAAAATACAAA
GATTTTTTTTTTCCGACAACATCCGGATCGATCTCAGACAGAGTCCACTCACTGTTCGTAACGACTAGACATACAGAAGATGACGA
ACAAGACCAATTTAGGTCTCTCCGTCTTCTTCCTCCTACTCTGCCTCTCCGCCGTCACATCAGATCTAGAATCCGACCGACGAGCA
CTCATCGCTCTCCGCGACGGCGTCCACGGCCGTCCTCTCCTCTGGAACCTAACCGCCCCGCCCTGCACTTGGGGAGGAGTCCAATG
CAATGCGGGTCGGGTCACAGCGCTCCGGCTACCCGGCGTGGGTTTATCCGGTCCGTTGCCAATCGCAATCGGAAACCTCACAAAGC
TCGAGACTTTATCGTTCCGGTTCAACGCGTTAACCGGTCCACTCCCGGCGGATTTCGCTAACCTAACTCTCCTCCGTTACCTTTAC
CTCCAAGGAAACGCCTTCTCCGAGGAGATACCTTCGTTCCCCTTCGATTTGCCCAACGTGATCCGGATCAACCTCGC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_197162 putative inactive receptor kinase [Arabidopsis thaliana] | 666 | 7e-068 |
| XP_002868799 predicted protein [Arabidopsis lyrata subsp. lyrata] | 649 | 7e-066 |
| XP_002868800 hypothetical protein ARALYDRAFT_356181 [Arabidopsis lyrata subsp. lyrata] | 649 | 7e-066 |
| NP_186938 putative inactive receptor kinase [Arabidopsis thaliana] | 487 | 4e-047 |
| XP_002882256 hypothetical protein ARALYDRAFT_896266 [Arabidopsis lyrata subsp. lyrata] | 487 | 4e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9FMD7 Probable inactive receptor kinase At5g16590 | 666 | 3e-069 |
| Q9M8T0 Probable inactive receptor kinase At3g02880 | 487 | 2e-048 |
| Q9LP77 Probable inactive receptor kinase At1g48480 | 352 | 9e-033 |
| Q9LVI6 Probable inactive receptor kinase RLK902 | 338 | 4e-031 |
| O48788 Probable inactive receptor kinase At2g26730 | 262 | 2e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0LGT4 Leucine-rich repeat receptor-like protein kinase (Fragment) | 666 | 5e-068 |
| C0LGM6 Leucine-rich repeat receptor-like protein kinase (Fragment) | 487 | 3e-047 |
| B9GUS3 Leucine-rich repeat transmembrane protein | 393 | 2e-036 |
| B9SYE5 ATP binding protein, putative | 387 | 1e-035 |
| B9H3B3 Predicted protein | 386 | 1e-035 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G16590.1 LRR1; ATP binding / kinase/ protein serine/threonine kinase | 666 | 3e-070 |
| AT3G02880.1 leucine-rich repeat transmembrane protein kinase, putative | 487 | 2e-049 |
| AT1G48480.1 RKL1; ATP binding / kinase/ protein serine/threonine kinase | 352 | 8e-034 |
| AT3G17840.1 RLK902; ATP binding / kinase/ protein serine/threonine kinase | 338 | 3e-032 |
| AT2G26730.1 leucine-rich repeat transmembrane protein kinase, putative | 262 | 2e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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