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Information for unigene UN53997
| FASTA Sequence |
| Unigene ID: UN53997 | Length: 740 |
SSR | | GGGGGGATCGCTCTCTTTCCACACGGCGAACAAGGAAAGAAAAGGTTGTACCTTTTCGCTCTGTTGCATTCCCGATCACTTGCAGA
AGATCTGCAGCTCGCATTTTGGGTTTTGATTCCTTTCTCATTTCGTGTGTGTGTGTGTGTGTTGATTCGATTGGAAACTGTCAAAA
TGAGTATGGTTGATGCGATAGTTCCCGGAGCAGACATGTCTCGCGTTGATGCTGATCTGTTGCAGCTTCAAGAGATGTCTTCCTTT
GTCCTTACCTCAAAACCCGGATTCACACAAACCCTCTTCGATCAGTGGCTCTCTCTTCCCCAAGCTCATCAACAGATTGCATCATT
GCTTCATGATGCGTTGTCTGGATCTCCTTTGAATGCTGTAACTGGTTCAAGCTCTGCCACAAGCAATGCTATACCATCCATGTTTC
CTGCGGGGAGCGCTCCTCCGCTTTCACCGAGAAGCTGCGGCTCACCTCGTATGACGACGAGGCAGAGAGCTGGTCCTTCTAACTTG
GGTTCTTCTCTGAAACCAACAACCGTAGAGCCTCCTGCTAAAGAGCCAATGCCTCAGTTTTATTTTCAAAATGGTCGCCCACCACC
AAGCGAGATGAAAGAGCAGTGTATGTTTAGAATCAACCACTTTTTCTATGGTCACATGGATGGACTGCAGATACAAGAGTTCAAGT
TAGTCACCCGGGAAATCTGCAAGCTCCCATCTTTCTTCTCCACTTCACTTTT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_198242 protein phosphatase 2 (formerly 2A), regulatory subunit B'' [Arabidopsis thaliana] | 741 | 2e-076 |
| NP_568509 protein phosphatase 2 (formerly 2A), regulatory subunit B'' [Arabidopsis thaliana] | 741 | 2e-076 |
| XP_002872330 calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] | 740 | 2e-076 |
| XP_002521983 calcium ion binding protein, putative [Ricinus communis] | 578 | 1e-057 |
| XP_002325339 predicted protein [Populus trichocarpa] | 575 | 3e-057 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q5QIT3 Protein phosphatase 2A beta | 741 | 1e-076 |
| Q8VZQ4 Putative phosphatase 2A regulatory subunit B protein | 741 | 1e-076 |
| B9S7L4 Calcium ion binding protein, putative | 578 | 9e-058 |
| B9IPA8 Predicted protein | 575 | 2e-057 |
| B9I5P2 Predicted protein | 571 | 6e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G28900.1 calcium-binding EF hand family protein | 741 | 7e-079 |
| AT5G28850.2 calcium-binding EF hand family protein | 741 | 7e-079 |
| AT1G54450.1 calcium-binding EF-hand family protein | 474 | 7e-048 |
| AT5G44090.1 calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative | 377 | 1e-036 |
| AT1G03960.1 calcium-binding EF hand family protein | 365 | 3e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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