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Information for unigene UN54005

FASTA Sequence
Unigene ID: UN54005Length: 709 SSR 
GGATGGCGAAGATGAGAGCGGATGGTCCGGTGGGAGAGATTGACACTCGTCCTCCCTTCCAATCCGTTAGAGACGCCGTTAGTTTA
TTCCGTCAAGTTAGCTTCTCTAAGCAACAACAACAACAACAACCGCGTCTCTCCTCCTCCTCCTTCTCATCTCAGGATGCAACGGA
GGTGTCTGAAAAAGAGACGCAGCTTCTGTTAGCAGAACAAGAAATGGACAGAATTCAGCTCTGTCTCGATACCTCTGTCAAAGCCA
AAGCAAAAGCTCTCTCTGATCTCGACTCTGCTCAACGAAACGCCTCTGATCTGAGGGCTAAACTAGAAGCCACAAAACAATCCAAA
AACTCTGCCATCTTAACCAAACACAAACTAAACCACCGGTTAGAGCAGCTTCGATCTCAAAACCAAGAAACAGAGATCGCTAGAGA
GAGCTACATTTTAGCCGCCGCGGAGCTACTCGTGGCGAGGCAAAAGCTAGCGGAGATAGAACAAGAGTTCAGCATCTCCGTGGAAG
AGAGGCTAGCAGAGCTTCAAAGGGCGGAGGAAGCAGAGTGTGCATCAACGGTTAACTCCCAAAAGATCAAAGACATGACACGTGAG
ATATCCGAGATGCGTAAGGCTGCTGAGAGGTTGAAGTCAGGTGCTGATAGGATGAAAGAGGATGAGGAAAAGATCAACGAGGAGAG
AGTGGAGATGGGGAGAGACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABD65130 hypothetical protein 40.t00005 [Brassica oleracea]8137e-085
ABD65106 ubiquitin family protein [Brassica oleracea]7501e-077
XP_002868079 hypothetical protein ARALYDRAFT_493156 [Arabidopsis lyrata subsp. lyrata]7501e-077
NP_193454 uncharacterized protein [Arabidopsis thaliana]7331e-075
NP_172679 uncharacterized protein [Arabidopsis thaliana]3674e-033

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q2A9B6 Putative uncharacterized protein8135e-085
Q2A9F5 Ubiquitin family protein7501e-077
O23564 Myosin heavy chain like protein7339e-076
Q9FWW5 T28K15.11 protein3672e-033
B9IH07 Predicted protein3637e-033

Arabidopsis top hits (Blast detail)Scoree value
AT4G17210.1 myosin heavy chain-related7336e-078
AT1G12150.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G17210.1); Has 136823 Blast hits to 68042 proteins in 2292 species: Archae - 1576; Bacteria - 22165; Metazoa - 64188; Fungi - 9966; Plants - 5333; Viruses - 600; Other Eukaryotes - 32995 (source: NCBI BLink).3672e-035
AT5G55860.1 unknown protein2632e-023
AT4G33390.1 unknown protein1361e-008
AT3G51720.1 unknown protein1296e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members