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Information for unigene UN54010
| FASTA Sequence |
| Unigene ID: UN54010 | Length: 470 |
SSR | | GATCTTTCTTCAGTTCGAATCTTTGGGGAAACAATGGGGGTCGTAACTATAATAACAACGCTACAAACTCAAACATGGGAGGAGGA
GGATCAACAAGTGGGAACAACACACTTAACGGTCCGTTTGGGAGTTCAGGGGTTGTAAACTGGGGTGCTCCTGGAGGAAACAATGG
TGTTAGTAACGAGAATGTGAAGTTTGGTTATGGAGGAAACGGTGAATCTGGTTTTGGATTGGGAGGAGTAAGAAACATTGGGCCTC
CTAGCAAGGCAGCAGCAGCACCATCATCTTCATTCTCTTCTAACAATGCGGGTTATGAAGCAGGAGGACTTGCAGAGTTTTATGGG
AATGGTGCAGTCTATAGTGATCCCACATGGAGATCATCAGCTCCTGAGACAGAAGGTCCTGCTTCTTTTAGCTATGGGATTGTAGG
AGGAGGAGGAGGAGGAGGTCCTTCTTCGGATGTTTCAGCT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002882552 hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp. lyrata] | 569 | 3e-057 |
| NP_850539 RNA recognition motif-containing protein [Arabidopsis thaliana] | 562 | 2e-056 |
| AAF21191 putative RNA-binding protein [Arabidopsis thaliana] | 562 | 2e-056 |
| NP_566321 RNA recognition motif-containing protein [Arabidopsis thaliana] | 562 | 2e-056 |
| AAK92717 putative RNA-binding protein [Arabidopsis thaliana] | 562 | 2e-056 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9NL38 N66 matrix protein | 129 | 3e-007 |
| Q9UVI4 Trihydrophobin | 124 | 1e-006 |
| P10496 Glycine-rich cell wall structural protein 1.8 | 121 | 2e-006 |
| O53553 Uncharacterized PE-PGRS family protein PE_PGRS54 | 120 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q8W555 AT3g07810/F17A17_15 | 562 | 1e-056 |
| Q94A00 Putative RNA-binding protein | 562 | 1e-056 |
| Q9SFD3 Putative RNA-binding protein | 562 | 1e-056 |
| Q6MWW6 PE-PGRS FAMILY PROTEIN | 155 | 2e-009 |
| Q8VIY9 PE_PGRS family protein | 152 | 5e-009 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G07810.1 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 563 | 1e-058 |
| AT3G07810.2 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 563 | 1e-058 |
| AT4G01985.1 unknown protein | 109 | 6e-006 |
| AT4G13340.1 leucine-rich repeat family protein / extensin family protein | 108 | 8e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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