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Information for unigene UN54035

FASTA Sequence
Unigene ID: UN54035Length: 888 SSR 
GGGCCTCTCTCGTGTGATTTACACTGCAAACGCGTACCTCGGCGATTAGGTCCCCGGCAAAGAAGAAGAAGAAGAGAGAAACAGAA
TGGCGACTCAAGGATCCGTACAGCTTTCCCAGAAGGAGGCTGACATCAAGATGATGTGTGCTGCTGAGGTTCACCTCGGAACCAAG
AACTGCAATTACCAAATGGAGCGTTACGTCTTCAAGAGACGCAACGACGGTATCTACATCTTTAACCTCGGCAAGACATGGGATAA
GCTGATGATGGCTGCAAGAGTTATCGTTGCTATTGAGAGCCCACAAGACATTATTGTGCAGTCAGCTAGGCCATATGGTCAGAGAG
CTGTTTTGAAGTTCGCTCAGTACACTGGAGCCAATGCCATTGCTGGAAGGCACACTCCCGGTACCTTCACTAACCAGATGCAAACC
TCATTCAGTGAGCCAAGGTTGTTGATTCTTACAGATCCTCGTACCGACCACCAGCCCATCAAGGAAGGTGCATTGGGAAACATTCC
AATCATTGCTTTCTGTGACACTGACTCTCCCATGAGGTTTGTTGACATCGGTATCCCCGCCAACAACAAGGGAAAGCACAGCATTG
GGTGTCTTTTCTGGCTTCTTGCTCGCATGGTCCTTCAGATGCGTGGTACCATTCGCCCTGCTCAGAAGTGGGATGTCATGGTTGAC
CTGTTCTTCTACAGGGAGCCCGAAGAGGCTAAGCCAGAGGATGAGGATGAAGTTGCCCCTCAGGCAGAGTTTGGACTTCCTGCTCC
TGAGTATGGCGGTGAGCAGTGGACCACTGCTGCGATCCCCGATGCCGCATGGCCAGGAGAGCCCAGCGCATCTCTGCTGCTCTGCT
GCTGCTTCTGGACGATCAGCGTGCTCAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
Q9ZSR8 RecName: Full=40S ribosomal protein SA; AltName: Full=Laminin receptor-like protein; AltName: Full=p4012932e-140
XP_002888871 hypothetical protein ARALYDRAFT_895089 [Arabidopsis lyrata subsp. lyrata]12502e-135
NP_177381 40S ribosomal protein Sa-1 [Arabidopsis thaliana]12261e-132
NP_001031267 40S ribosomal protein Sa-1 [Arabidopsis thaliana]12261e-132
CAA61547 40kD protein [Arabidopsis thaliana]12082e-130

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZSR8 40S ribosomal protein SA12931e-141
Q08682 40S ribosomal protein Sa-112266e-134
Q8H173 40S ribosomal protein Sa-211049e-120
O80377 40S ribosomal protein SA10303e-111
O65751 40S ribosomal protein SA10242e-110

TrEMBL top hits (Blast detail)Scoree value
Q2V4D3 AT1G72370 protein12269e-133
A9P891 Predicted protein10673e-114
A9P801 Putative uncharacterized protein10475e-112
B9NA44 Predicted protein10475e-112
A9P906 Putative uncharacterized protein10459e-112

Arabidopsis top hits (Blast detail)Scoree value
AT1G72370.1 P40; structural constituent of ribosome12266e-135
AT1G72370.2 P40; structural constituent of ribosome12266e-135
AT3G04770.2 RPSAb (40S ribosomal protein SA B); structural constituent of ribosome11048e-121
AT3G04770.1 RPSAb (40S ribosomal protein SA B); structural constituent of ribosome9443e-102

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members