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Information for unigene UN54053

FASTA Sequence
Unigene ID: UN54053Length: 800 SSR 
GGGACTCACTCAAATCCACAATCTCCAAAAACATCCGAGATCTCCCTTCTCCCTTTGTGTGCGCTCCGTTCAGTTAGACATGGCCA
CCACCGCATCTCCAGCTCCGACGAAGAAATCGAGAAACAGCAGAAAGGCGTTGAAGCAGAAGAACGAGATCGTGACGGCGGACACT
CCGTCTCCGCCGTCGCCTGTCTCCGTCGCCAAGGGGAAGGGGAAGAAGTCGTTCGAGAAAGATCTGCTGGAGATGCAGGCGATGCT
GGAGAAGATGACGATCGAGAAGGATAAGACGGAGGAGTTGCTTAAGGAGAAGGAGGAGATTCTGAGGAAGAAGGAGGAGGAGCTCG
TGACGAGAGACGCTGAGCAGGAGAGGCTCAAGACGGAGCTGAAGAAGCTTCAGAAGATGAAGGAGTTCAAACCTAACATGACGTTT
GCTTGTGGCCAGTCTCCCACACAAGGTGAGGAAGAAAAGGTGAACAAGAAGAAGAAGAAGAAGGATTGTCCCGAGAGGAAGCGACC
ATCGTCGTCATACATTCTGTGGTGTAAGGAGCAGAGGGATGAAATCAAGAAGGAGAATCCTGAAGCTGACTTTAAGGAGACTTCGA
ACATTCTTGGCGCTAAATGGAAGTCTCTTAGCGCGGAAGAGAAGAAGCCTTACGAGGAGAGGTACAAGGTGGAGAAAGAAGCTTAC
CTCCAGGTGGTTGCTAAGGAGAAGCGTGAGAGAGAGGCGATGAAGCTTCTTGATGATGAGCAGAAGCAGAAGACTGCTATGGATTT
GCTAAATCAGTATCTTCAGTTTGTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194111 HMG (high mobility group) box protein [Arabidopsis thaliana]9689e-103
NP_001190816 HMG (high mobility group) box protein [Arabidopsis thaliana]9689e-103
ACC91248 high mobility group HMG1/2 family protein [Arabidopsis halleri]9492e-100
AAC35540 contains similarity to HMG (high mobility group) box (Pfam: HMG_box.hmm, scores: 70.67, 53.09 and 80.15) [Arabidopsis thaliana]8505e-089
AAS79547 At4g11080 [Arabidopsis thaliana]8371e-087

Swiss-Prot top hits (Blast detail)Scoree value
Q5KEP6 Non-histone chromosomal protein 61772e-012
O04235 FACT complex subunit SSRP11772e-012
P11633 Non-histone chromosomal protein 6B1763e-012
Q9UVL1 Non-histone chromosomal protein 61763e-012
Q05153 FACT complex subunit SSRP11763e-012

TrEMBL top hits (Blast detail)Scoree value
Q9SUP7 98b like protein9687e-103
B2WS76 High mobility group HMG1/2 family protein9491e-100
O82510 F2P3.3 protein8503e-089
Q700E0 At4g110808371e-087
Q9T012 98b like protein8217e-086

Arabidopsis top hits (Blast detail)Scoree value
AT4G23800.1 high mobility group (HMG1/2) family protein9863e-107
AT4G11080.1 high mobility group (HMG1/2) family protein8539e-092
AT3G28730.1 ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP); transcription factor1763e-013
AT5G23420.1 HMGB6; transcription factor1234e-007
AT1G62760.1 invertase/pectin methylesterase inhibitor family protein1191e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members