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Information for unigene UN54140

FASTA Sequence
Unigene ID: UN54140Length: 812 SSR 
GGGAATTCTCGCGAGCTGTGTGCGACTGACTCTTCCCCCTTAGGGTTTTCGTCTATTGCAAAATCAACACCGATCTCCTCTCTTTC
AATCTCAATCCACCTTCGATTTTGGCGTTTAACACCACCTCCTCCGACCCTAAAACCCTAGAGAAACCCTAATCGGAATGTCATCC
GATCACATGCCAGGAGGAGTAGGTGGAGGAGGAGCTTCGAAGACGAAGAAGAAGAAGAATCACAACAACAACAACAACAACAAGCT
GAGCCAGAACCGATCCAAACCAACGTCGATCCCTAGACCAAACCGACCGGTTCCTCTCCCACTCGCATCTCCCTCGAACTCCTTCG
CCTCGGAGGAAGAGGACTACCCCATGCTCAAGGTCAGCCTGAGCTCAATCTCCAAGCTCGAAGTTCGCAACTTTAAACGGAAACTA
ACCGCCGAGCTGGACGACGTCAGGAGCTTGATCGCACGGTTCTTCGATCCCCACAAGAAGACGAAAACAGGTCATAACAAGAAAGG
CACGGCTCAGATTCTCAAGAGCTGCAACGCTCTGCTTTCCAAGCTGATGAAGCATAAGGACGGGGTGGGTGTTCAATGTCCCCGTT
GACGCTAAAGGACTCGGCTTGCATGATTACCACGCTATTGTGAAAGAGCCTATGGATTTGGGGACGGTGAAGGGTAAGCTAGGGGA
CGGTTCGTATGAGTCTCCGTTGGATTTCGCCGAAGATGTGAGGCTTACTTTCAACAATGCGATTTTGTATAACCCTGTTGGGCACG
AGGTTCATAGTATGGCGAAGTTTCTGTTGAACATGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF97259 Contains similarity to female sterile homeotic-related protein Frg-1 from Mus musculus gb|AF045462 and contains a bromodomain PF|00439 [Arabidopsis thaliana]3496e-031
NP_564037 DNA-binding bromodomain-containing protein [Arabidopsis thaliana]3496e-031
AAL07107 unknown protein [Arabidopsis thaliana]3471e-030
XP_002892967 hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp. lyrata]3452e-030
XP_002888909 hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp. lyrata]3282e-028

Swiss-Prot top hits (Blast detail)Scoree value
P13709 Homeotic protein female sterile2184e-017
Q91Y44 Bromodomain testis-specific protein2175e-017
Q32S26 Bromodomain-containing protein 22132e-016
Q5TJG6 Bromodomain-containing protein 22132e-016
P25440 Bromodomain-containing protein 22132e-016

TrEMBL top hits (Blast detail)Scoree value
Q8H1D7 Putative uncharacterized protein At1g177903494e-031
Q9LMU8 F2H15.2 protein3494e-031
Q93ZU2 Putative uncharacterized protein At1g177903477e-031
Q9S7T1 At1g731503172e-027
Q0WSA6 Putative uncharacterized protein At1g731503092e-026

Arabidopsis top hits (Blast detail)Scoree value
AT1G17790.1 DNA-binding bromodomain-containing protein3492e-033
AT1G73150.1 GTE3 (GLOBAL TRANSCRIPTION FACTOR GROUP E 3); DNA binding / histone binding3171e-029
AT5G65630.1 GTE7 (Global transcription factor group E 7); DNA binding2695e-024
AT1G06230.1 GTE4 (GLOBAL TRANSCRIPTION FACTOR GROUP E 4); DNA binding2642e-023
AT1G06230.2 GTE4 (GLOBAL TRANSCRIPTION FACTOR GROUP E 4); DNA binding2642e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members