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Information for unigene UN54144
| FASTA Sequence |
| Unigene ID: UN54144 | Length: 617 |
SSR | | ACTTCTTCTTCCATCTTTCATGTGAGAGAGAGAGTAGAATTCTGAAGATGAGTACGAGAAGAAGCAAAGCGGAAGGGAAGAAGATT
TTAAGAGACATGAGTGGGGAAGAGGAAGAAGATGAAGATACATCTGAAGAGGAAGAAGATGATGATGATGAAGAAGAAGAAGAAGA
AGAAGAAGTGGCTTTGGAAAAGAAGCAGAAAGGCAAAGCTACTACTACTACTACAAGTAGTAGCAGTGGTACTGGAGCTTGTCAAG
TGGAGAGATGTACTGAAGATATGAGCAGAGCCAAACAATACCACAAACGACACAAAGTCTGCGAGTTTCATGCCAAAGCTCCTCTT
GTTCGGATCTCTGGTCTTTACCAACGTTTCTGCCAACAATGTAGCAGGTTTCACGAGGTAGGTGAGTTTGATGAAACCAAGCGGAG
TTGCAGGAGACGCTTAGCTGGACACAATCAGAGAAGGCGTAGAAACACAACTCAATAAAAATAAAAATAAAAGACATGTGAAACGT
CTCATGAACTACTAGGCTTTGCTTGCTCTCTTCTGTCAGTCTCTTTGTAATCTCTCTGTTTCTCCATATTTGCTTGTAATCTCTAG
CTATCTGCTAAAACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002879473 hypothetical protein ARALYDRAFT_482334 [Arabidopsis lyrata subsp. lyrata] | 464 | 1e-044 |
| CAB94233 Squamosa promoter binding protein-like 3 [Arabidopsis thaliana] | 456 | 1e-043 |
| NP_565771 squamosa promoter-binding-like protein 3 [Arabidopsis thaliana] | 456 | 1e-043 |
| AAM67271 putative squamosa-promoter binding protein [Arabidopsis thaliana] | 452 | 4e-043 |
| XP_002509450 Squamosa promoter-binding protein, putative [Ricinus communis] | 396 | 1e-036 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P93015 Squamosa promoter-binding-like protein 3 | 456 | 6e-045 |
| Q38741 Squamosa promoter-binding protein 1 | 358 | 1e-033 |
| Q38740 Squamosa promoter-binding protein 2 | 346 | 4e-032 |
| Q9S7A9 Squamosa promoter-binding-like protein 4 | 340 | 2e-031 |
| Q9S758 Squamosa promoter-binding-like protein 5 | 330 | 3e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RBB6 Squamosa promoter-binding protein, putative | 396 | 8e-037 |
| Q52UU1 Squamosa promoter binding-like protein | 379 | 8e-035 |
| C6T3L3 Putative uncharacterized protein | 369 | 1e-033 |
| B9N3H7 Putative uncharacterized protein | 364 | 4e-033 |
| B9T4B7 Squamosa promoter-binding protein, putative | 361 | 9e-033 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G33810.1 SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3); DNA binding / transcription factor | 457 | 5e-046 |
| AT1G53160.2 SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4); DNA binding / transcription factor | 340 | 2e-032 |
| AT1G53160.1 SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4); DNA binding / transcription factor | 340 | 2e-032 |
| AT3G15270.1 SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5); DNA binding / transcription factor | 330 | 3e-031 |
| AT3G60030.1 SPL12 (squamosa promoter-binding protein-like 12); transcription factor | 299 | 1e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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