Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN54156

FASTA Sequence
Unigene ID: UN54156Length: 625 SSR 
CCTGCAGCTGCCACTCTTTTCTCCTTTCCCGAAGATTAGCCGCAAAAGCTCTCCTTTGTTTCACACAACTTTCCATCCCGACAAAT
CACAAAACCGCGTCTTTTGTCTTAACGCGGGATCGTTGATTCCTCTGGATTTTCGTGAATGAATATCCAGACGGATCAGGGCGGAT
CTCGCGCCTTTTCGTCCTCTCCAGCCGTATTTAGAAAGATCGAGCTTCACCCCGCGAGGAAACCCTTCAACGGCTTCTCTAATCGC
GGCTCCGATTTCAAGATGGAGACTTTGAATCCACGCTCCTCTAACAACAACAACAACAGAGCCTTCTCGTCGTCACACTCCGTTCC
TGATTCTTTTGAATTGGATCGGGAGCTTACTTTCACCAAAACCATCCGCAAAATCGGTGCTGGTTTGAAGAATCTCGGAAACACGT
GTTACCTTAACTCGGTGTTGCAATGCTTGACATACACTGAGCCGTTAGCTGCTTGCTTGACTGAAAAAAATGTGAATGGGAAAGAG
ACTCAGAACAATCCCCCAAGCAGTTTGGAGGCAAAAGAGGTCCTTAAGGGGCAAAACGGTACTGCACCAGTTAAAGCAAGTGATCA
AAGTGCTCCTATTGTCTTAACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866243 ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]3395e-030
BAB08869 unnamed protein product [Arabidopsis thaliana]3332e-029
NP_568873 ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]3332e-029
AAG42761 ubiquitin-specific protease 23 [Arabidopsis thaliana]3332e-029
CAN82847 hypothetical protein VITISV_000504 [Vitis vinifera]1836e-012

Swiss-Prot top hits (Blast detail)Scoree value
Q9FPS4 Ubiquitin carboxyl-terminal hydrolase 233331e-030
B1AQJ2 Ubiquitin carboxyl-terminal hydrolase 361341e-007
Q9FPS2 Ubiquitin carboxyl-terminal hydrolase 251332e-007
Q9P275 Ubiquitin carboxyl-terminal hydrolase 361295e-007
P0C7I0 Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 81279e-007

TrEMBL top hits (Blast detail)Scoree value
A5B4K5 Ubiquitin carboxyl-terminal hydrolase1834e-012
A5CBT2 Ubiquitin carboxyl-terminal hydrolase1791e-011
B9IME3 Ubiquitin carboxyl-terminal hydrolase (Fragment)1736e-011
B3RPT1 Ubiquitin carboxyl-terminal hydrolase1557e-009
B8B3I9 Ubiquitin carboxyl-terminal hydrolase1557e-009

Arabidopsis top hits (Blast detail)Scoree value
AT5G57990.1 UBP23 (UBIQUITIN-SPECIFIC PROTEASE 23); ubiquitin thiolesterase/ ubiquitin-specific protease3331e-031
AT3G14400.1 UBP25 (UBIQUITIN-SPECIFIC PROTEASE 25); ubiquitin thiolesterase/ ubiquitin-specific protease1332e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members