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Information for unigene UN54157

FASTA Sequence
Unigene ID: UN54157Length: 832 SSR 
AGGGAAAGAGCAAAAGAATAAAAGAGAGAGAGACATTAATCGAGAATCACTTGTCTGTTTGTTTCGTCGAATCGCAAGCTCGAAGA
AGGAATCACGAGTCGAAGAAGTTTCGATTTTTCAGATCTGAATCCGTTAAGAGAGAGAGAGAGAGAGAGAATAATGGGCAGTCGAG
GCGGCGGCGGCGTAAGTAACGCGAAGGCGGGTGGTGTTCCAGCGTCGTGTAGGAAGGTGGTTGAGAGTTTGAAAGAGATCGTGAGC
TGTTCTGAGTTGGAGATCTACGCGATGCTTGTCGATTGCGATATGGATCCTGACGAGACCGTTAGTCGTCTTCTTTCTCAAGATAC
TTTTCACGAGGTGAAGAGCAGACGAGACAAGAAGAAAGAGACCAGCAAAGATCCAGGAGAGTCTTGGACACGTAGCACACCCAATC
GCGGTGCTAGAAGCAGCGGTCATGGTGGTGGAAACAGATTTAAATCCAATGAGAGGGGAAGTGTTCAAAGTGTACCTGCAAACAGA
AGAGAGAACGGAACACGTAACCATTGGGCTGGCTCTTCTTCAACACCTGGTGTCCTTGGGCGCCAACCTCCACCCAACAGCGATCC
TACTAACGCTGAAGTTAAGAAAGCACAACCAACGGGCACAAGTGATGCAGTTACTTCCTCTTCGCTGCCGACTCCTCCTGTGTATC
AATCCGCTTGGGCCAATGCTAACCCAGGTCAGAGAACAATGGCTGAGATTGTGAAGATGGGTAGGCCTCTTCTTCATCAGAAGAAG
AACGTTGTTGCTGTGCCTCGTTCAACAGAGCTCAAGAGAGTGGAAGCAAAGCTCCGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870069 predicted protein [Arabidopsis lyrata subsp. lyrata]8022e-083
NP_193549 uncharacterized protein [Arabidopsis thaliana]7072e-072
CAB53656 hypothetical protein [Arabidopsis thaliana]6831e-069
XP_002519742 conserved hypothetical protein [Ricinus communis]4284e-040
NP_174230 Kinase-related protein [Arabidopsis thaliana]3991e-036

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SVV7 Putative uncharacterized protein AT4g181506838e-070
B9S173 Putative uncharacterized protein4283e-040
Q8VZT4 Putative uncharacterized protein At1g293703997e-037
Q8W0Z3 At1g29350/F15D2_273971e-036
C5YVW6 Putative uncharacterized protein Sb09g0287303082e-026

Arabidopsis top hits (Blast detail)Scoree value
AT4G18150.1 unknown protein7078e-075
AT1G29370.1 kinase-related3994e-039
AT1G29350.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: kinase-related (TAIR:AT1G29370.1); Has 13611 Blast hits to 7582 proteins in 387 species: Archae - 0; Bacteria - 354; Metazoa - 5683; Fungi - 1538; Plants - 892; Viruses - 68; Other Eukaryotes - 5076 (source: NCBI BLink).3977e-039
AT5G46380.1 unknown protein2767e-025
AT3G07660.1 unknown protein2131e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members