 |
Information for unigene UN54172
| FASTA Sequence |
| Unigene ID: UN54172 | Length: 675 |
SSR | | GGATAATTTAAGTTGACTACATTTACAGGGGATCGGGAACGGCATCCCACTTGGAGCGGTGGTGACAACACCGGAGATCGCCGGCG
TTCTAAGCCGACGGTGTTATTTTAATACTTTTGGTGGAAACCCAATGTGCACTGTCGCGGGACATGCAGTCCTTAGAGTCATTCAC
CAAGAGAAGCTCCAAGAGAACGCTTTCCTCGTTGGCTCTCATCTTAAACGTAGACTTACACATCTCAAAGACAAGTACGAAATCAT
TGGAGACGTTAGAGGAAGAGGATTGATGCTAGGAGTTGAGTTTGTCACAAACCGCGACTTAAGAACTCCAGCTAAATCAGAGACTC
TCCATTTAATGGATCAAATGAAAGAGATGGGAGTGTTGGTGGGTAAAGGTGGGTTCTACGGAAACGTTTTCAGAATCACTCCTCCT
CTCTGCTTCACCATGTCAGACTCTGATTTCCTTGTGGATGTGATGGATCACGCATTGTCCAAGATGTGATTTACTCTCATTTTGTG
ATATCTTTCATGATGCTTCACCTTTTGCGTAGTTGTGTGTGTGTGTATATATAAACGACACATTACAAAAAGTGAAATTATAACCT
TCCTGTTGCTTTTTAGTATCCAGATGTATCACGGAACATCTATAAATAATAAAGTCTCGCTGTTTTGTTTCTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187498 PYRIMIDINE 4 [Arabidopsis thaliana] | 746 | 4e-077 |
| XP_002884701 hypothetical protein ARALYDRAFT_897023 [Arabidopsis lyrata subsp. lyrata] | 728 | 4e-075 |
| XP_002267787 PREDICTED: hypothetical protein [Vitis vinifera] | 680 | 2e-069 |
| CBI18070 unnamed protein product [Vitis vinifera] | 680 | 2e-069 |
| XP_002323655 predicted protein [Populus trichocarpa] | 676 | 5e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SR86 Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial | 746 | 2e-078 |
| Q94AL9 Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial | 626 | 1e-064 |
| Q940M2 Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial | 520 | 3e-052 |
| Q17QF0 Alanine--glyoxylate aminotransferase 2, mitochondrial | 386 | 1e-036 |
| Q5RFA3 Alanine--glyoxylate aminotransferase 2, mitochondrial | 379 | 6e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WWF1 Aminotransferase like protein | 746 | 3e-077 |
| B9IGP2 Predicted protein | 676 | 3e-069 |
| B9SZ94 Alanine-glyoxylate aminotransferase, putative | 665 | 6e-068 |
| B9HD98 Predicted protein | 658 | 4e-067 |
| B0M1A8 Peroxisomal aminotransferase (Fragment) | 655 | 9e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G08860.1 alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative | 747 | 1e-079 |
| AT2G38400.1 AGT3 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 3); alanine-glyoxylate transaminase/ catalytic/ pyridoxal phosphate binding / transaminase | 627 | 1e-065 |
| AT4G39660.1 AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2); alanine-glyoxylate transaminase/ catalytic/ pyridoxal phosphate binding / transaminase | 521 | 2e-053 |
| AT5G46180.1 delta-OAT; ornithine-oxo-acid transaminase | 166 | 3e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
