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Information for unigene UN54174
| FASTA Sequence |
| Unigene ID: UN54174 | Length: 547 |
SSR | | GGGAGAACATAGAGATCGAGAGAGAGAGAAGAAGAAGAACAGAACTTTGATCTTGTGAGAGAAAATGGCTGCTTCAGTGATGCTTT
CATCAGTGACATTGAAACCGGCGGGTTTCACGGTGGAGAAGATGTCGGCGAGAGGATTACCGTCGCTCACAAGAGCTTCTCCTTCT
TCCTTCAGAATCGTCGCGAGTGGCGTCAAGAAGATCAAGACAGACAAGCCCTTTGGACTGAGGGACGGCCTCGACGCTTCCGGCAG
AAAGGGCAAGGGATATGGTGTTTACAAATTCGTCGACAAGTACGGTGCTAACGTCGATGGATACAGTCCTATCTACAACGAGGACG
AGTGGTCAGCGAGTGGTGACGTGTACAAGGGAGGGGTCACTGGTTTGGCTATTTGGGCGGTGACACTCGCCGGAATTCTTGCCGGA
GGAGCTCTTCTTGTGTACAACACAAGTGCTTTGGCTCAGTAAAATCATGAAAGTGTGTGTACTTATGCTTATCTGTTAGTGTCATT
GTTCTGTTCTATGTAATGTTGTTAAGTAACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| P49108 RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic; Flags: Precursor | 664 | 7e-068 |
| ABM54168 PSII 10Kd peptide [Brassica juncea] | 651 | 2e-066 |
| ABL97960 photosystem II 10kDa polytpeptide [Brassica rapa] | 641 | 3e-065 |
| AAO32060 photosystem II 10kDa polypeptide [Brassica rapa subsp. pekinensis] | 631 | 5e-064 |
| NP_178025 photosystem II subunit R [Arabidopsis thaliana] | 623 | 4e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49108 Photosystem II 10 kDa polypeptide, chloroplastic | 664 | 4e-069 |
| P27202 Photosystem II 10 kDa polypeptide, chloroplastic | 623 | 2e-064 |
| Q40163 Photosystem II 10 kDa polypeptide, chloroplastic | 520 | 2e-052 |
| P06183 Photosystem II 10 kDa polypeptide, chloroplastic | 514 | 9e-052 |
| Q40519 Photosystem II 10 kDa polypeptide, chloroplastic | 502 | 2e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1Z271 PSII 10Kd peptide | 651 | 2e-066 |
| A1YN01 Photosystem II 10kDa polytpeptide | 641 | 2e-065 |
| Q84XP6 Photosystem II 10kDa polypeptide (Fragment) | 631 | 3e-064 |
| Q0WWI7 PSII-R protein | 623 | 3e-063 |
| B4YYB9 ST244 | 614 | 3e-062 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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