Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN54196

FASTA Sequence
Unigene ID: UN54196Length: 705 SSR 
GGAAATGCAAGATAAAGTTCTTCGAACTTATGCTGAGATGGAGAATCTAATGGCCAGGACTAAACGTAATGCTGAGAACGATAAAA
AGTTCGCCATACAGAAATTTGCAACGAGCCTTCTGGATGTGGCGGATAATCTTGGGAGAGCTTCTTCGGTTGTCAAGGAGAGTTTT
TCTAAGATTGACACTTCAAAAGATTCGGCTGGTGCTACTCCGCTGTTGAAAACCCTTTTAGAAGGAGTGGAGATGACTGAGAAACA
ATTAGCTGAGGTATTTAAGAAATCTGGTTTGGTGAAAGAAGATCCTGTAAATGAACTTTTTGATCCAAACCGACATAACGCAGTGT
TCCAAGTCCCAGATGCTTCCAAGCCAGCAGGCACAATTGCTCATGTCCTAAAGTCTGGATACTCGTTGTTTGATCGAGTTATAAGA
CCAGCTGAGGTTGGTGTTACTTGCGCTGTGGTGAACCAAGAGAAAGAGTCTGAAGCTTGAAAAACTCAAAAAACAACAAAGAGTTG
AGCTTTGTTTGAACTTTTACACCTTCATTTTGTTGTTTTCTTTTATACTTGTTAGCTCTCTCTCTCTCTATCACACACACACATAT
TCATTGGATGAACAAGATCTCATAAAAGTAGCTTAACGTTGCTGCACTTCCAGGGAAGCCCTGGTTCTGTAACTTTATTTCACAAA
ATTTTCTTGAAGTTATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864383 hypothetical protein ARALYDRAFT_495605 [Arabidopsis lyrata subsp. lyrata]7017e-072
NP_200331 co-chaperone GrpE family protein [Arabidopsis thaliana]6855e-070
AAM63252 chaperone GrpE-like protein [Arabidopsis thaliana]6855e-070
NP_567757 molecular chaperone GrpE [Arabidopsis thaliana]6604e-067
CAB36524 grpE like protein [Arabidopsis thaliana]6604e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q79V15 Protein grpE2353e-019
Q07US4 Protein grpE2301e-018
B3Q970 Protein grpE2301e-018
B6JCI1 Protein grpE2292e-018
Q3SW78 Protein grpE2282e-018

TrEMBL top hits (Blast detail)Scoree value
Q8LDE9 GrpE protein homolog6853e-070
Q9FLP3 GrpE protein homolog6853e-070
Q8LB47 GrpE protein homolog6603e-067
Q9SZ18 GrpE protein homolog6603e-067
A5BCM7 Putative uncharacterized protein6121e-061

Arabidopsis top hits (Blast detail)Scoree value
AT5G55200.1 co-chaperone grpE protein, putative6862e-072
AT4G26780.1 AR192; adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization6602e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  100%

Unigene Members