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Information for unigene UN54207

FASTA Sequence
Unigene ID: UN54207Length: 386 SSR 
GCTCCACACCGTGGCTGACATATCTTGTGCTGACTGCAATGAACCCTTGGGCTGGAAGTTCGAGCGAGCCTACGAGAGCTCACAAA
AGTACAAGGAGGGCAAGTTCATATTCGAAAAGGCTAAGATTGTCAAGGAAGAGGATTGGTAGTGAAAGCCAACATGTTGAATTCAT
TATTGGATTGACTCAAAAACTGTACATAGATATTAAAAAAAACTTGGCTTTGTCGATTCCAATCTTTATGGATTTCACAAGTCGTC
GTCATCATCATCATCATCATCCATTTTCCGGTTCATTGTCTCTCTCTCTGCATGTTGTTAAATATTTAAATAATGTCAGTGTCCTG
TGTCTAAGTGAATGTTTTGTATATTTTACCTTAATAGCTATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869544 hypothetical protein ARALYDRAFT_328916 [Arabidopsis lyrata subsp. lyrata]2414e-019
CAB38286 putative protein [Arabidopsis thaliana]2371e-018
NP_001031733 yippee-like protein [Arabidopsis thaliana]2371e-018
XP_002318443 predicted protein [Populus trichocarpa]2163e-016
XP_002321386 predicted protein [Populus trichocarpa]2137e-016

Swiss-Prot top hits (Blast detail)Scoree value
Q9T096 Protein yippee-like At4g277452374e-020
Q9W2X7 Protein yippee-like CG153091846e-014
Q65Z59 Protein yippee-like 11731e-012
Q9DG42 Protein yippee-like 11731e-012
O60688 Protein yippee-like 11731e-012

TrEMBL top hits (Blast detail)Scoree value
B9I1Z5 Predicted protein2162e-016
B9IDM3 Predicted protein2135e-016
C5Y4B9 Putative uncharacterized protein Sb05g0214702063e-015
B8BL07 Putative uncharacterized protein2054e-015
Q2R2Q4 Os11g0551800 protein2054e-015

Arabidopsis top hits (Blast detail)Scoree value
AT4G27745.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: yippee family protein (TAIR:AT5G53940.1); Has 697 Blast hits to 697 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 401; Fungi - 132; Plants - 110; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).2384e-021
AT5G53940.1 yippee family protein1596e-012
AT3G08990.1 yippee family protein1515e-011
AT2G40110.1 yippee family protein1391e-009
AT3G11230.1 yippee family protein1345e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members