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Information for unigene UN54216

FASTA Sequence
Unigene ID: UN54216Length: 745 SSR 
GGATCTCAAAACTAATCTCTTTGCCGTCTCTCTCGTCTCTCCTCTCTGTGTCGATGAATCTCAAAACATGAATCCAAATTGAGAAA
CCTCTTTCGTTTTCTTGAATCTGTGGTGGGTCTCTGGCGCCTTCTCTCTCTTTCTCAGTCTCTCTCAGGCGTTCTCTCTCCGACAA
TCTCTCTCTCCGGCGACCTCTCTCTCCGGCGACTTCTCTCTCTCCGGCGACCTCTCTCTCTCTCTCGCTCAGATTCCGGATCTAAG
TAATAACCAGTTAGCAACCGTACAGCAGCTTGAGTTCATTGCAGAAGCATATACTAGCGGGATTAACGATTGTAACCCATATTCTT
AAAGAAGGTGGAAAATTTATTGCAAAAATATTCCATGGAAAAGACACAAGTCTCTTGTACTGTCATCTGAAGTTGTTTTTTCCAAC
TGTGACTTTTGGAAAACCTAAAAGCAGCCGCAATTCTAGTATAGGATGGATTTGGAGTCTCTTAATACAATAGCAATCCTTGATGC
TCAAAGGGAATACATGGACATGAATGAAGAAGATGCTTTGAATATGGAAAATGCAATGGGGGAGGGAGAAACAGAGATGCAAGAAC
CAGAAGAAAGTGACACAGAAGCTGCTGAAACAAACACAGAAGCTGCTGAAACAACTCAAGCGACAAAACCACGTAAGAGACGTCTA
ACTTCTAAAGTCTGGAAAGATTTTACATCGGCTGGGGTTGAAAGTGATGGCAAGGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_851026 S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana]2626e-021
AAM65500 cell division-like protein [Arabidopsis thaliana]2626e-021
BAH19769 AT5G01230 [Arabidopsis thaliana]2626e-021
XP_002870937 hypothetical protein ARALYDRAFT_486954 [Arabidopsis lyrata subsp. lyrata]2626e-021
XP_002325916 predicted protein [Populus trichocarpa]2563e-020

Swiss-Prot top hits (Blast detail)Scoree value
Q9UET6 Putative ribosomal RNA methyltransferase 11728e-012
Q54VA8 rRNA methyltransferase 1 homolog1592e-010
Q5T200 Zinc finger CCCH domain-containing protein 131592e-010
Q22031 Putative ribosomal RNA methyltransferase R74.71531e-009
O36015 Putative ribosomal RNA methyltransferase C4F10.03c1503e-009

TrEMBL top hits (Blast detail)Scoree value
B9DGA2 AT5G01230 protein2624e-021
Q8GUN8 Putative cell division protein2624e-021
Q8LAA2 Cell division-like protein2624e-021
B9IQ42 Predicted protein2562e-020
Q2HUG0 Ribosomal RNA methyltransferase RrmJ/FtsJ2562e-020

Arabidopsis top hits (Blast detail)Scoree value
AT5G01230.1 FtsJ-like methyltransferase family protein2623e-023
AT2G40650.1 pre-mRNA splicing factor PRP38 family protein1297e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members