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Information for unigene UN54249

FASTA Sequence
Unigene ID: UN54249Length: 731 SSR 
GCGAGAAAAACAATACACAGAAACAAAGAAAGAGTTTTGATTGGCTAGCTAAGAAAAGAGAGAGAGAGAAAAAAATAACAGTTTTG
GAAAATGGATTTGACACGTCCCTCTTCTGGTCATGATCAATCAGAGGATCCACTCAAGATTCACCATCCAGAGGAAGAAGAGCATC
ATGAGAGCCGAGCATCTAAAATGTTCGGGAAAGTAAAGGCAAAAGCTAAGAAGCTGAAGAACAGACTTACTAAACAAGGTGATGAG
CAAGAAGATCACGATGTAGTGGACGAAGAAGAAGATGAATCTGACGAGCCAGAGCCAGAGCAAGAGCCAGAGAAGCATGTCTCACC
AGTGAATGAAGTTCCCAATGTGAGAACGAGTCAACCTCAGTCTTTGACTCATCCCGGAGAAACTAGTGTTCCGGAGGAGATCATTC
CATCAGGGACGAGGGATTCTTCAACTGATTACACCGGACGAGTCGAACCTGAACCGTTACGAGATGTTAGTACTTACGAACATGAG
GCACCGTCTTATCCTGTAAGAACATCAGACGTGTCGGAGGCAGGGAAGAGAGCAGAGGAGAGACTCATCAAGTGCCACTGAAGACT
CCCGTGTCTCTGCTCTCCTCAACAGAGGATGAGACAAGTCCTGGTGAAGATGGGTTACTGGGTGGTCAACGGGAAGTCAACACTGA
TATGCTCAAAAGATTCGAGGACGATCTGAGTGGTGGTGAATCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAR21079 stress responsive protein [Brassica oleracea var. acephala]5646e-056
BAJ34196 unnamed protein product [Thellungiella halophila]3908e-036
BAB10527 low-temperature-induced 65 kD protein [Arabidopsis thaliana]3665e-033
NP_200043 CAP160 protein [Arabidopsis thaliana]3665e-033
CAA47902 lti65 [Arabidopsis thaliana]3665e-033

Swiss-Prot top hits (Blast detail)Scoree value
Q04980 Low-temperature-induced 65 kDa protein3662e-034
Q06738 Low-temperature-induced 78 kDa protein1942e-014

TrEMBL top hits (Blast detail)Scoree value
Q67BB3 Stress responsive protein5644e-056
Q2V2Z2 Putative uncharacterized protein At5g52300.23493e-031
C0Z2L4 AT5G52310 protein1943e-013
Q39060 Cor78 protein1943e-013
Q56Y03 Low-temperature-induced protein 78 (Fragment)1943e-013

Arabidopsis top hits (Blast detail)Scoree value
AT5G52300.1 LTI65 (LOW-TEMPERATURE-INDUCED 65)3662e-035
AT5G52300.2 LTI65 (LOW-TEMPERATURE-INDUCED 65)3492e-033
AT5G52310.1 LTI78 (LOW-TEMPERATURE-INDUCED 78)1942e-015
AT4G25580.1 stress-responsive protein-related1781e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members