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Information for unigene UN54315

FASTA Sequence
Unigene ID: UN54315Length: 875 SSR 
GGCCTTTTCCTCTTAATTTCTGTTACCAAACCTCCTCTGCTATCAATCAATCATGCTCTTCAATCCATCATTAATGAATTCGTTTC
AACTCTTCTCTTTCTCCTTCTTTATAAACAGCTTCGTATAAACTAGCTTCAAACCCCCCTAATTCCTCCTCTCAAGAAGTTGAAGC
GATGGTGATGAACCCAACTGCAAATCCCTGACTCAACCGGCAATTCCCCATTCGCTTTGTATTTCTACTTCTCCCCGTCGACACAG
TCCCGAAAATCAAATTCTCAGATCTATTAATAGCAACTCAAACAGCGAAATCAACCGGAAAAGCCCCACGGCTCTCTTCTTCAATG
ACGTCGTTCCTGGTTTTGGACAGTTTGAGATATGGTGACTGTTAATTCATTCTGAGAAGCGAGAAACACAGTTAAAGGAGTTGTGT
AAGGGATTGAGTTTGGGATCACTTTTCTTCCAGCGTAGCTTCTTGGCTCCTGTTGAGGTAATGCAAAGTCTTTGCCTGAAAAGAAG
GATCAACAAAAGAGCCATATGAATTTGCTAGGAACATTGTGGGAGTTTATGCGACATAGCTTCGGATGAGCTTATTATCTCGTCCA
CGGATGCCTTTTGTCTCAAGACAAGAAAGCCTTACACCATCACTAAACAAAGAGAGAAGCGGACAGAAGCAGAGCATGAGAAGTTT
GTAGAAGCTTTAAAACTCTGGCAGAGCTTGGAGACGAATCGAATGTGTGTGTGTGTGATTTAGCTGAATTTAGAGAGTCTTCTGAT
GCACATTCTAAAATACTACGTTTGAAGAACATATTGGGTTTTATGTTTTAACATTGGGTTATCTTCAGATTGTGGGTCAGAGAGAT
GTTCCAAAGCTTAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_198542 protein REVEILLE 2 / DNA binding / transcription factor [Arabidopsis thaliana]1955e-013
AAS09985 MYB transcription factor [Arabidopsis thaliana]1955e-013
XP_002868495 hypothetical protein ARALYDRAFT_493689 [Arabidopsis lyrata subsp. lyrata]1902e-012
BAD97871 LHY homologue2 [Lemna gibba]1525e-008
XP_002267976 PREDICTED: hypothetical protein [Vitis vinifera]1508e-008

Swiss-Prot top hits (Blast detail)Scoree value
P92973 Protein CCA11343e-007
Q6R0H1 Protein LHY1253e-006

TrEMBL top hits (Blast detail)Scoree value
Q6R0G3 MYB transcription factor1953e-013
Q50K75 LHY homologue21523e-008
Q50K79 LHY homologue21408e-007
A9PI51 Putative uncharacterized protein1381e-006
B9I959 Predicted protein1381e-006

Arabidopsis top hits (Blast detail)Scoree value
AT5G37260.1 RVE2 (REVEILLE 2); DNA binding / transcription factor1952e-015
AT2G46830.1 CCA1 (CIRCADIAN CLOCK ASSOCIATED 1); DNA binding / transcription activator/ transcription factor/ transcription repressor1342e-008
AT1G01060.1 LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor1253e-007
AT1G01060.2 LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor1253e-007
AT1G01060.3 LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor1253e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members