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Information for unigene UN54327

FASTA Sequence
Unigene ID: UN54327Length: 681 SSR 
GGATCTCAAAACCAACAAAACAAACAAAAAAAACTTTTTCAAATCCCTAAAAAAGATGTCGACGGAGGAAGAACCCAAGGTCGTGG
AGTCAGGAGACGCCGAAGCCGCCGCCACGGTGACGACGACGGAGAAGAAACCTGCTGCTAAAGCTAAAGCTAAGAAGACGAAGGAA
GCTAAGAAGAAGCCTGCTGCTGCTGCTGCGCCGAGGAAGAGAACCACTTCGTCTCATCCTCCTTACGAAGAGATGATAAAGGATGC
GATCGTGACGTTGAAGGAGAGGACCGGATCTAGCCAATACGCGATTCAGAAGTTCATCGAGGAGAAGCAGAAGTCGCTTCCTCCTA
CTTTCAGGAAGCTTCTTCTCGTCAATCTCAGGAGACTCGTCGCTTCCGGGAAGCTCGTCAAAGTCAAAGCCTCTTTCAAGATTCCG
TCTGCTGCTTCTGCTAAACCGGCTGCGGCGACGAAACCGGTTAAGAAGAAACCGGCTGCTGCTGTTACTAAACCGAAGGGTAAAGC
AGCTGCTGCTCCTGCTAAGAAGGCCAAACCAGCTGCTAAAGGAACCAAGAAACCTGCTGCTGCTGCTAAGCCTAAGGCAAAGACCA
CAACAACTAAAGCTGCTGCGAAGCCTAAGACGAAGAGTGTAGCTGCTGTTTCGAAGACTAAAGCGGTTGCTGCTAAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180620 histone H1.2 [Arabidopsis thaliana]6335e-064
XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata]6112e-061
NP_172161 histone H1.1 [Arabidopsis thaliana]5458e-054
XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata]5422e-053
NP_001189643 histone H1.2 [Arabidopsis thaliana]5198e-051

Swiss-Prot top hits (Blast detail)Scoree value
P26569 Histone H1.26332e-065
P26568 Histone H1.15454e-055
P37218 Histone H14844e-048
Q9M5W4 Histone H14291e-041
P08283 Histone H14173e-040

TrEMBL top hits (Blast detail)Scoree value
B9GS56 Histone H14892e-047
C0Z3A1 AT2G30620 protein4855e-047
B9H8I5 Histone H14676e-045
Q9SLS1 Histone H14578e-044
Q8LKI1 Histone H1 (Fragment)4505e-043

Arabidopsis top hits (Blast detail)Scoree value
AT2G30620.1 histone H1.26467e-068
AT1G06760.1 histone H1, putative5453e-056
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding2497e-022
AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding1861e-014
AT3G18035.1 HON4; DNA binding1602e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members