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Information for unigene UN54368
| FASTA Sequence |
| Unigene ID: UN54368 | Length: 827 |
SSR | | GGAACCTGTAACCGTACGGTTGTTTCATAGAGAGAGAGAGAGAGATCAAATCACAATACGCGTCTCCGTTTTCTCCACGCGCCTTC
TTCATTCCCGATTCCCCCCTCCACGCGCATCCGTGCGATGGCCAATCCGCCAACGTTACCGATCTCAGACCATTCCGGCGGCTCCC
AACCTCAGCAACCCGCCGTATCCACACCGTTGTTCCGCACCTTCCTCTCTCGCCTCTCCGCGTCGATCCGCCAGAGCCTATCGCAG
CGACGTCCGTGGCTGGAGCTCGTGGATCGGAGCGCGATCTCACGGCCGGACTCCCTCGCCGACGCGTACTCTCGGATCAGGAGGAA
CATCCCTTACTTCAAGGTGAACTACGTGACGATCGTCTCCCTCGTGCTCGCGCTCTCCCTCCTCTCCCATCCCTTATCTCTCCTCG
TCCTCCTCTGCCTATTCGGCGCGTGGATCTTCCTCTACCTATTCCGCCAGTCCGATCAGCCGCTCTCCGTCCTCGGACGCACGTTC
TCGGATCGCGAGACGCTCGCCGTTTTGGTCGTCTTGACGATCGTCGTCGTCTTCTTGACCAGCGTCGGGTCTCCGTTGACCACCGC
TCTGATGATCGGTTTCGGAATCGTGTGTTTGCACGGCGCATTCAGAGTCCCGGAGGATCTTTTCTTGGACGAGCAGGAACCTGCCA
ATATTGGATTGTTGTCATTCCTCAGCGGAGCTGCTACATCCGCAGCAGTCGCCGCCGCTTCAGCTCCTGTGTCAGCTCGTGTTTGA
TTTGGCAGATACACAAAACCAGTTTCTTCTTCGTTAACAGACTGATACATTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871155 prenylated rab receptor 2 [Arabidopsis lyrata subsp. lyrata] | 959 | 1e-101 |
| NP_196157 PRA1 family protein B3 [Arabidopsis thaliana] | 950 | 1e-100 |
| CAC80645 prenylated Rab receptor 2 [Arabidopsis thaliana] | 950 | 1e-100 |
| XP_002278095 PREDICTED: hypothetical protein [Vitis vinifera] | 774 | 3e-080 |
| CBI25415 unnamed protein product [Vitis vinifera] | 772 | 5e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FLB6 PRA1 family protein B3 | 950 | 6e-102 |
| Q9LYN0 PRA1 family protein B1 | 732 | 1e-076 |
| Q9SIY7 PRA1 family protein B2 | 715 | 1e-074 |
| O80915 PRA1 family protein B4 | 636 | 1e-065 |
| Q9M012 PRA1 family protein B5 | 557 | 2e-056 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S480 Prenylated Rab acceptor protein, putative | 736 | 6e-076 |
| B9HHW1 Predicted protein | 730 | 3e-075 |
| A9PCQ1 Putative uncharacterized protein | 710 | 6e-073 |
| B9HSI3 Predicted protein | 668 | 4e-068 |
| B9SL15 Prenylated Rab acceptor protein, putative | 667 | 6e-068 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G05380.1 PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3) | 951 | 4e-103 |
| AT3G56110.1 PRA1.B1 (PRENYLATED RAB ACCEPTOR 1.B1) | 732 | 1e-077 |
| AT2G40380.1 PRA1.B2 (PRENYLATED RAB ACCEPTOR 1.B2) | 715 | 9e-076 |
| AT2G38360.1 PRA1.B4 (PRENYLATED RAB ACCEPTOR 1.B4) | 636 | 1e-066 |
| AT5G01640.1 PRA1.B5 (PRENYLATED RAB ACCEPTOR 1.B5) | 557 | 2e-057 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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