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Information for unigene UN54454

FASTA Sequence
Unigene ID: UN54454Length: 863 SSR 
GGGGAACAGTCTTTCCAACAGCTTCCAGAGTTTCGATTTTTGCTAAGAACCAACAACCAAAAGTTTCGATTTTGAGCAGATGGGCG
GGTCAGGAAACTGGATTAAGTCACTACTATCTCACAGAAAACACTCTGATGATCATCAGCAGGAGAAGTTAACCAGCAAGAAGAAG
TGGAAGCTGTGGAGGCTTTCATCTGAGAGCTTCACGTCTTCCTCCTCCTCCTCCAAGGAATGTTTTCTCAACCGCCGTGGAAGCTA
CGGACTTTCTTCTCTAGGCTCAGAGCCACCGTCCTTCTCCGCCGACGAAGCTTTCGCTGTGGCCATGGCAGCTCTCATTCGAGCTC
CTCCCAAGGATTTCTTGTTGGTTAAGAGAGAATGGGCTTCCACGAGAATCCAAGCTGCCTTTCGTGCTTTCCTGGCAAGACAGGCG
TTTAGAGCTTTGAAGGCAGTAGTGAGAATCCAGGCGATATTTCGTGGTAGACAAGTTAGGAAACAAGCGGCTGTTACACTCAGGTG
TATGCAAGCTCTTGTTCGTGTTCAGTCTCGTGTAAGAGCTCATCGCAGAGCACCTTCAGAGTCAACTGAACTCAAAGATCCTACAA
AGCAGAGCGAGAAGAGTTGGTGTGGTAGTCCAAGAAGTGTTAAGGAAGTGAAAACAAAGTTACAGATGAAGCAAGAAAGAGCTATT
AAGAGGGAGAGAGCTATGGTGTACGCTCTCACACATCAGTCGAGGACGTGTCCAAGTCCAAACGCAAGATCTATACCCACCGGAGA
TAGTAACTGGAAGACATCTCTGGGCCAAGAGCCAGCGAAGCTAAATGACGAGTTATGTTTGTTTCTTTTCAGTCAGTTTCACAGCC
TGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892953 IQ-domain 7 [Arabidopsis lyrata subsp. lyrata]9204e-097
NP_173191 protein IQ-domain 7 [Arabidopsis thaliana]9016e-095
AAF97308 Hypothetical protein [Arabidopsis thaliana]6865e-070
XP_002888887 IQ-domain 8 [Arabidopsis lyrata subsp. lyrata]5818e-058
NP_177411 IQ-domain 8 protein [Arabidopsis thaliana]5782e-057

Swiss-Prot top hits (Blast detail)Scoree value
Q8LPG9 Protein IQ-DOMAIN 142014e-015
Q8L4D8 Protein IQ-DOMAIN 311656e-011
Q9SF32 Protein IQ-DOMAIN 11478e-009
Q9FXI5 Protein IQ-DOMAIN 321405e-008

TrEMBL top hits (Blast detail)Scoree value
Q2NND9 At1g174809014e-095
Q9LQK1 F28G4.3 protein6864e-070
Q9CAI2 At1g726705781e-057
C6T8G0 Putative uncharacterized protein5305e-052
B9GVC8 Predicted protein5271e-051

Arabidopsis top hits (Blast detail)Scoree value
AT1G17480.1 IQD7 (IQ-domain 7); calmodulin binding9013e-097
AT1G72670.1 iqd8 (IQ-domain 8); calmodulin binding8045e-086
AT3G22190.1 IQD5 (IQ-domain 5); calmodulin binding3206e-030
AT2G26180.1 IQD6 (IQ-domain 6); calmodulin binding3125e-029
AT1G01110.2 IQD18 (IQ-domain 18)2086e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members